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SCNpilot_expt_500_p_scaffold_712

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_712_1
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127..2052)
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Vibrio splendidus RepID=UPI0002D8FD6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC73896.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
SCNpilot_expt_500_p_scaffold_712_2
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2052..3494)
DNA (1443bp) protein (481aa)
Tn7-like transposition protein C n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MTW3_9THEO
Uncharacterized protein {ECO:0000313|EMBL:KIH76257.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Tn7-like transposition protein C
SCNpilot_expt_500_p_scaffold_712_3
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3491..5629)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLL2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KIH76256.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Tn7-like transposition protein B
SCNpilot_expt_500_p_scaffold_712_4
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5626..6435)
DNA (810bp) protein (270aa)
Transposon Tn7-like transposase protein A n=2 Tax=Pseudomonas syringae group RepID=F3ES15_9PSED
Transposon Tn7-like transposase protein A {ECO:0000313|EMBL:EGH60447.1}; Flags: Fragment;; TaxID=629265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. maculicola str. ES4326.;"
TnsA endonuclease
SCNpilot_expt_500_p_scaffold_712_5
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6681..6974)
DNA (294bp) protein (98aa)
integrase n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0202
NODE_94, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97249.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
integrase catalytic subunit
SCNpilot_expt_500_p_scaffold_712_6
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7470..7844)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VH01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU12082.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
SCNpilot_expt_500_p_scaffold_712_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7856..8788)
DNA (933bp) protein (311aa)
RHS repeat-associated core domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFV9_9GAMM rbh
RHS repeat-associated core domain protein rbh
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG89779.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_712_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8999..14749)
DNA (5751bp) protein (1917aa)
Rhs family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97953.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Rhs family protein
SCNpilot_expt_500_p_scaffold_712_9
unknown

Not on your lists

comp(15506..16036)
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_712_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16045..17040)
DNA (996bp) protein (332aa)
RHS repeat-associated core domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFV9_9GAMM
RHS repeat-associated core domain protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AGG89779.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_712_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17541..17918)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7R0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP17198.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
SCNpilot_expt_500_p_scaffold_712_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17924..19060)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A7220
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABR13348.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_p_scaffold_712_13
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19057..19779)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A4D91
Uncharacterized protein {ECO:0000313|EMBL:CCA88621.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
SCNpilot_expt_500_p_scaffold_712_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19772..21787)
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A3286 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ABR13346.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_712_15
unknown

Not on your lists

comp(21915..22841)
DNA (927bp) protein (309aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_712_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22910..24253
DNA (1344bp) protein (448aa)
Uncharacterized protein n=10 Tax=Pseudomonas aeruginosa RepID=I6RS72_PSEAI rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ABR13345.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_p_scaffold_712_17
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24240..25328)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A405_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA88627.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_712_18
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25321..25962)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LJH2_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09704.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_500_p_scaffold_712_19
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25946..28024)
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A404_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA88625.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_712_20

Not on your lists

comp(28378..28662)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CDK9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD80527.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_712_21
unknown

Not on your lists

comp(29979..30083)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_712_22
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30340..30726)
DNA (387bp) protein (129aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003643EDF
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_500_p_scaffold_712_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31186..32100)
DNA (915bp) protein (305aa)
Putative membrane-associated protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NB68_9GAMM rbh
putative membrane-associated protein rbh
Putative membrane-associated protein {ECO:0000313|EMBL:AGG87819.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_712_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32207..33409)
DNA (1203bp) protein (401aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE86_9GAMM rbh
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGG87818.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_712_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33542..34282
DNA (741bp) protein (247aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W160_9GAMM
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:EIL93201.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
geranylgeranyl pyrophosphate synthase
Displaying 25 items

View Taxonomy