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SCNpilot_expt_500_p_scaffold_11880

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_11880_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..776)
DNA (774bp) protein (258aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Poly(A) polymerase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB20_9GAMM
poly(A) polymerase
SCNpilot_expt_500_p_scaffold_11880_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1362..1685
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W425_9GAMM
Ferredoxin {ECO:0000313|EMBL:EIL94216.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin
SCNpilot_expt_500_p_scaffold_11880_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1764..2360)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96663.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_11880_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2411..3289)
DNA (879bp) protein (293aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC7_9GAMM
SCNpilot_expt_500_p_scaffold_11880_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3461..3850
DNA (390bp) protein (130aa)
Glycine cleavage system transcriptional repressor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W428_9GAMM
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:EIL94219.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycine cleavage system regulatory protein
SCNpilot_expt_500_p_scaffold_11880_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4099..4560
DNA (462bp) protein (154aa)
Peroxiredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ25_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG89683.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_11880_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4624..6006
DNA (1383bp) protein (461aa)
PhoH family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W430_9GAMM rbh
PhoH family protein {ECO:0000313|EMBL:EIL94221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PhoH family protein rbh
SCNpilot_expt_500_p_scaffold_11880_8
unknown

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6393..6530
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11880_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6633..7091
DNA (459bp) protein (153aa)
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKE4_9GAMM
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase {ECO:0000313|EMBL:EIL87685.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
Displaying 9 items

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