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SCNpilot_expt_500_p_scaffold_2361

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2361_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..380
DNA (378bp) protein (126aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89485.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89485.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI4_9GAMM
SCNpilot_expt_500_p_scaffold_2361_2
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(391..2358)
DNA (1968bp) protein (656aa)
High affinity FE2+/Pb2+ permease n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZ46_JANMA rbh
high affinity FE2+/Pb2+ permease; K07243 high-affinity iron transporter rbh
High affinity FE2+/Pb2+ permease {ECO:0000313|EMBL:ABR90105.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_expt_500_p_scaffold_2361_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2703..4256
DNA (1554bp) protein (518aa)
Peptidase M4, thermolysin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP92_9GAMM rbh
Peptidase M4, thermolysin {ECO:0000313|EMBL:EIM01284.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc metalloprotease (elastase)
SCNpilot_expt_500_p_scaffold_2361_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4422..5825
DNA (1404bp) protein (468aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Kynurenine 3-monooxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI5_9GAMM rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase rbh
SCNpilot_expt_500_p_scaffold_2361_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5818..6225
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W051_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3293)
SCNpilot_expt_500_p_scaffold_2361_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6331..7536)
DNA (1206bp) protein (402aa)
General secretion pathway protein F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ1_9GAMM rbh
General secretion pathway protein F {ECO:0000313|EMBL:EIL88492.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein F; K02455 general secretion pathway protein F rbh
SCNpilot_expt_500_p_scaffold_2361_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7541..9016)
DNA (1476bp) protein (492aa)
Type II secretion system protein E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ2_9GAMM rbh
Type II secretion system protein E {ECO:0000313|EMBL:EIL88493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II secretion system protein E; K02454 general secretion pathway protein E rbh
SCNpilot_expt_500_p_scaffold_2361_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9024..11123)
DNA (2100bp) protein (700aa)
Type II and III secretion system protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ3_9GAMM rbh
Type II and III secretion system protein {ECO:0000313|EMBL:EIL88494.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II and III secretion system protein; K02453 general secretion pathway protein D rbh
SCNpilot_expt_500_p_scaffold_2361_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11158..11625)
DNA (468bp) protein (156aa)
Putative general secretion pathway related transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ4_9GAMM
Putative general secretion pathway related transmembrane protein {ECO:0000313|EMBL:EIL88495.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative general secretion pathway related transmembrane protein; K02452 general secretion pathway protein C
SCNpilot_expt_500_p_scaffold_2361_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11704..12021)
DNA (318bp) protein (106aa)
General secretory pathway protein N n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ5_9GAMM
General secretory pathway protein N {ECO:0000313|EMBL:EIL88496.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Displaying 10 items

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