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SCNpilot_expt_500_p_scaffold_2978

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2978_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..329
DNA (327bp) protein (109aa)
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM
Factor for inversion stimulation Fis, transcriptional activator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_2978_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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427..2037
DNA (1611bp) protein (537aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhodanobacter denitrificans RepID=M4NI91_9GAMM rbh
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_2978_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2181..2891
DNA (711bp) protein (237aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHK8_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87510.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_2978_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2914..3432)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96578.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF2782)
SCNpilot_expt_500_p_scaffold_2978_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3526..6261
DNA (2736bp) protein (912aa)
DNA polymerase I (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V0_9GAMM rbh
DNA polymerase I {ECO:0000313|EMBL:EIL93791.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_p_scaffold_2978_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6592..6810
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93792.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2978_7
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6875..9244
DNA (2370bp) protein (790aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970, ECO:0000313|EMBL:AJP47634.1}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
DNA/RNA helicase, superfamily I n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLN7_AZOSU
DNA/RNA helicase, superfamily I
SCNpilot_expt_500_p_scaffold_2978_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..11402
DNA (2022bp) protein (674aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ6_9GAMM rbh
trypsin-like serine protease with C-terminal PDZ domain rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_2978_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11427..12446)
DNA (1020bp) protein (340aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT3_9GAMM rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL96574.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily rbh
SCNpilot_expt_500_p_scaffold_2978_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..13806)
DNA (1254bp) protein (418aa)
Putative enzyme of heme biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NAK4_9GAMM rbh
putative enzyme of heme biosynthesis rbh
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:AGG87504.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_2978_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13803..14984)
DNA (1182bp) protein (394aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V4_9GAMM rbh
putative enzyme of heme biosynthesis rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_2978_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15044..15835)
DNA (792bp) protein (264aa)
Uroporphyrinogen-III synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V5_9GAMM rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EIL93796.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uroporphyrinogen-III synthase rbh
SCNpilot_expt_500_p_scaffold_2978_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15894..16379
DNA (486bp) protein (162aa)
Thioesterase domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT4_9GAMM
thioesterase-like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_2978_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16836..17282
DNA (447bp) protein (149aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAK0_9GAMM
Rhodanese-related sulfurtransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_2978_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17360..18448)
DNA (1089bp) protein (363aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT7_9GAMM rbh
2-polyprenylphenol hydroxylase-like oxidoreductase rbh
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:AGG87498.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_2978_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18476..18688
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87497.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 16 items

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