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SCNpilot_expt_500_p_scaffold_4272

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4272_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ16_9GAMM
Protein of unknown function (DUF2807)
Uncharacterized protein {ECO:0000313|EMBL:AGG88039.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4272_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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785..1279
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ17_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88038.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4272_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1329..2132)
DNA (804bp) protein (268aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EIL91095.1}; EC=3.6.1.19 {ECO:0000313|EMBL:EIL91095.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV54_9GAMM rbh
MazG family protein rbh
SCNpilot_expt_500_p_scaffold_4272_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2237..3043)
DNA (807bp) protein (269aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7) rbh
3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Rhodanobacter denitrificans RepID=M4NJU1_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_4272_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3046..3603)
DNA (558bp) protein (186aa)
ADP-ribose pyrophosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ20_9GAMM rbh
ADP-ribose pyrophosphatase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_4272_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3627..4403)
DNA (777bp) protein (259aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ21_9GAMM rbh
inositol monophosphatase/fructose-1,6-bisphosphatase family protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_4272_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4400..5161)
DNA (762bp) protein (254aa)
Type II secretion system protein N (GspN) n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ22_9GAMM rbh
type II secretion system protein N (GspN) rbh
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:AGG88033.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4272_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5212..6633
DNA (1422bp) protein (474aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS5_9GAMM rbh
adenosylmethionine-8-amino-7-oxononanoate transaminase rbh
SCNpilot_expt_500_p_scaffold_4272_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6685..7434
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
16S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI0003725822
RNA methyltransferase, RsmE family
SCNpilot_expt_500_p_scaffold_4272_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7441..8124)
DNA (684bp) protein (228aa)
TonB-denpendent receptor n=1 Tax=Dyella ginsengisoli RepID=UPI000345ED95
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGG87794.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 10 items

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