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SCNpilot_expt_500_p_scaffold_4335

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4335_1
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1097
DNA (837bp) protein (279aa)
Transposase Y1 Tnp domain-containing protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EN50_9GAMM rbh
Transposase Y1 Tnp domain-containing protein {ECO:0000313|EMBL:ERJ19285.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_4335_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1472..1756)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA9_9GAMM
putative addiction module antidote protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_500_p_scaffold_4335_3
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1898..3952)
DNA (2055bp) protein (685aa)
Outer membrane receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PZM3_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49450.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_4335_4
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4061..4402
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGS5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFN49449.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4335_5
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4402..5064
DNA (663bp) protein (221aa)
transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI0003800FBA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49448.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
DNA-binding response regulator rbh
SCNpilot_expt_500_p_scaffold_4335_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5061..6407
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
phoQ; two-component sensor histidine kinase (EC:2.7.13.3) rbh
Two-component sensor histidine kinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4J1_CAUCN rbh
SCNpilot_expt_500_p_scaffold_4335_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6623..7126)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02988.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4335_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7312..8601)
DNA (1290bp) protein (430aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA topoisomerase 4 subunit A n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS7_9GAMM
Displaying 8 items

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