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SCNpilot_expt_500_p_scaffold_4898

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4898_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..352)
DNA (351bp) protein (117aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.41)
Beta-ketoacyl-[ACP] synthase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N8_9GAMM
Beta-ketoacyl-[ACP] synthase I {ECO:0000313|EMBL:EIL93029.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_p_scaffold_4898_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(354..962)
DNA (609bp) protein (203aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobact
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA (EC:4.2.1.59) rbh
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N7_9GAMM rbh
SCNpilot_expt_500_p_scaffold_4898_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1087..2535)
DNA (1449bp) protein (483aa)
Aspartate oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NQZ5_9GAMM rbh
aspartate oxidase rbh
Aspartate oxidase {ECO:0000313|EMBL:AGG89991.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4898_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2532..3557)
DNA (1026bp) protein (342aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
quinolinate synthetase (EC:2.5.1.72) rbh
Quinolinate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL1_9GAMM rbh
SCNpilot_expt_500_p_scaffold_4898_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3832..5085)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGI9_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89994.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4898_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5066..5356)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT42_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90383.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4898_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5425..6678)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQZ9_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89996.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_4898_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6859..7431)
DNA (573bp) protein (191aa)
SCO1/SenC family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMF1_9GAMM rbh
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_4898_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..7852)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93393.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying 9 items

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