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SCNpilot_expt_500_p_scaffold_3108

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3108_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1200)
DNA (1200bp) protein (400aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW61_9GAMM rbh
amino acid transporter rbh
Amino acid transporter {ECO:0000313|EMBL:AGG90507.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_3108_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1294..2208
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI8_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90508.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_3108_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2234..3550
DNA (1317bp) protein (439aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19229.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Putative uncharacterized protein id=2528220 bin=GWF1_Xanthomonadales_69_6 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCNpilot_expt_500_p_scaffold_3108_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3612..4697
DNA (1086bp) protein (362aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase IV n=1 Tax=Rhodanobacter denitrificans RepID=M4NHV2_9GAMM rbh
nucleotidyltransferase/DNA polymerase involved in DNA repair rbh
SCNpilot_expt_500_p_scaffold_3108_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4739..6022)
DNA (1284bp) protein (428aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
histidine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI0003484533
signal transduction histidine kinase
SCNpilot_expt_500_p_scaffold_3108_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6006..6692)
DNA (687bp) protein (229aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WVS9_9GAMM rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG90373.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_3108_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7033..8763)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034956A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX16061.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
TonB domain/peptidase M56 domain-containing protein
SCNpilot_expt_500_p_scaffold_3108_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8769..9164)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000362BC74
Uncharacterized protein {ECO:0000313|EMBL:GAN45341.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3108_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9236..9724)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036B289A
Uncharacterized protein {ECO:0000313|EMBL:AHX16484.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_expt_500_p_scaffold_3108_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9834..10097)
DNA (264bp) protein (88aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSY1_9GAMM
alpha-L-glutamate ligase, RimK family
Displaying 10 items

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