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SCNpilot_expt_500_p_scaffold_3226

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3226_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..824)
DNA (822bp) protein (274aa)
iolA; malonate-semialdehyde dehydrogenase IolA; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Caulobacter sp. AP07 RepID=J3AKQ7_9CAUL
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL33306.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_expt_500_p_scaffold_3226_2
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(999..1817)
DNA (819bp) protein (273aa)
iolB; myo-inositol catabolism protein IolB; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-] rbh
5-deoxyglucuronate isomerase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000363A8D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49455.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
SCNpilot_expt_500_p_scaffold_3226_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2023..2913)
DNA (891bp) protein (297aa)
iolE; myo-inositol catabolism protein IolE; K03335 inosose dehydratase [EC:4.2.1.44] rbh
Myo-inositol catabolism protein IolE n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4I6_CAUCN rbh
IolE protein {ECO:0000313|EMBL:AAK23281.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_expt_500_p_scaffold_3226_4
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2910..4742)
DNA (1833bp) protein (611aa)
iolD; myo-inositol catabolism protein IolD; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-] rbh
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037854EC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49457.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
SCNpilot_expt_500_p_scaffold_3226_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..6678)
DNA (1935bp) protein (645aa)
iolC; 5-dehydro-2-deoxygluconokinase IolC (EC:2.7.1.92); K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] rbh
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GSD5_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL33310.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_expt_500_p_scaffold_3226_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6766..7656)
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J3AKR1_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49459.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
iolR; transcriptional regulator IolR rbh
SCNpilot_expt_500_p_scaffold_3226_7
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7787..8770
DNA (984bp) protein (328aa)
myo-inositol 2-dehydrogenase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Myo-inositol 2-dehydrogenase IdhA n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4I2_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:KFN49460.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
SCNpilot_expt_500_p_scaffold_3226_8
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8784..9761
DNA (978bp) protein (326aa)
myo-inositol 2-dehydrogenase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18] rbh
inositol 2-dehydrogenase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000376C8EC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49461.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
SCNpilot_expt_500_p_scaffold_3226_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9900..11192)
DNA (1293bp) protein (431aa)
appA; phosphoanhydride phosphohydrolase; K01093 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
histidine acid phosphatase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000372B511 rbh
Histidine acid phosphatase {ECO:0000313|EMBL:EJL33314.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_expt_500_p_scaffold_3226_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11343..13520)
DNA (2178bp) protein (726aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037B2986 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49463.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
TonB-dependent receptor
Displaying 10 items

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