ggKbase home page

SCNpilot_expt_500_p_scaffold_3744

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3744_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..224
DNA (222bp) protein (74aa)
Twitching motility protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZK2_9GAMM
Twitching motility protein {ECO:0000313|EMBL:EIL92643.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pilus retraction ATPase PilT
SCNpilot_expt_500_p_scaffold_3744_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

379..1548
DNA (1170bp) protein (390aa)
Twitching motility protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU7_9GAMM rbh
Twitching motility protein {ECO:0000313|EMBL:EIL99738.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pilus retraction protein PilT rbh
SCNpilot_expt_500_p_scaffold_3744_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1617..2027)
DNA (411bp) protein (137aa)
Transport-associated protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV74_9GAMM
Transport-associated protein {ECO:0000313|EMBL:EIL91115.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative periplasmic or secreted lipoprotein
SCNpilot_expt_500_p_scaffold_3744_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2277..4061)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV73_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91114.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_3744_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..5260)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate carbamoyltransferase (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV72_9GAMM rbh
SCNpilot_expt_500_p_scaffold_3744_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5293..5742)
DNA (450bp) protein (150aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative Holliday junction resolvase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU2_9GAMM
RNAse H-fold protein YqgF
SCNpilot_expt_500_p_scaffold_3744_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5739..6299)
DNA (561bp) protein (187aa)
UPF0301 protein UUA_08064 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU1_9GAMM rbh
UPF0301 protein UUA_08064 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_3744_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6344..7162)
DNA (819bp) protein (273aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ34_9GAMM rbh
TonB family protein rbh
TonB family protein {ECO:0000313|EMBL:AGG88021.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_3744_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7210..8187)
DNA (978bp) protein (326aa)
glutathione synthetase (EC:6.3.2.3) rbh
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutathione synthetase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ33_9GAMM rbh
SCNpilot_expt_500_p_scaffold_3744_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8534..8887
DNA (354bp) protein (118aa)
pilus response regulator PilG n=1 Tax=Dyella ginsengisoli RepID=UPI0003675625
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88023.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 10 items

View Taxonomy