ggKbase home page

SCNpilot_expt_500_p_scaffold_3809

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3809_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..117
DNA (117bp) protein (39aa)
Short chain fatty acid transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS46_9GAMM
Short chain fatty acid transporter {ECO:0000313|EMBL:EIL90037.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
short chain fatty acids transporter
SCNpilot_expt_500_p_scaffold_3809_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..1433)
DNA (1275bp) protein (425aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI0002FF6C39 rbh
Membrane protein {ECO:0000313|EMBL:AHX15848.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC-type transport system, involved in lipoprotein release, permease component rbh
SCNpilot_expt_500_p_scaffold_3809_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1445..2611)
DNA (1167bp) protein (389aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI0002F3DCC0 rbh
Membrane protein {ECO:0000313|EMBL:AIF46852.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ABC-type transport system, involved in lipoprotein release, permease component rbh
SCNpilot_expt_500_p_scaffold_3809_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..3308)
DNA (687bp) protein (229aa)
ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU8_9GAMM rbh
ABC-type antimicrobial peptide transport system, ATPase component rbh
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG90388.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_3809_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..4593)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W284_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93575.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit rbh
SCNpilot_expt_500_p_scaffold_3809_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4832..5518
DNA (687bp) protein (229aa)
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT48_9GAMM rbh
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EIM02640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase rbh
SCNpilot_expt_500_p_scaffold_3809_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5601..6014
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W286_9GAMM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
large conductance mechanosensitive channel protein
SCNpilot_expt_500_p_scaffold_3809_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6121..7557
DNA (1437bp) protein (479aa)
Peptidase M28 n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV2_9GAMM rbh
Aminopeptidase {ECO:0000313|EMBL:EIL90044.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative aminopeptidase rbh
SCNpilot_expt_500_p_scaffold_3809_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7598..8809)
DNA (1212bp) protein (404aa)
multidrug transporter n=1 Tax=Dyella japonica RepID=UPI000366E84F
Acriflavine resistance protein B {ECO:0000313|EMBL:AHX15841.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cation/multidrug efflux pump
Displaying 9 items

View Taxonomy