ggKbase home page

SCNpilot_expt_500_p_scaffold_3916

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3916_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..468
DNA (468bp) protein (156aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV2_9GAMM
SCNpilot_expt_500_p_scaffold_3916_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..1125
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF96_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98137.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3916_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1145..2461)
DNA (1317bp) protein (439aa)
N-acyl-L-amino acid amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF97_9GAMM rbh
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:EIL98138.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Metal-dependent amidase/aminoacylase/carboxypeptidase
SCNpilot_expt_500_p_scaffold_3916_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2557..3675)
DNA (1119bp) protein (373aa)
Putative ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU9_9GAMM rbh
putative ATPase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_3916_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3684..4373)
DNA (690bp) protein (230aa)
Putative hydrolase of the alpha/beta superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NMD1_9GAMM rbh
putative hydrolase of the alpha/beta superfamily rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_3916_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4416..5006
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3916_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5271..5804)
DNA (534bp) protein (178aa)
Cytochrome c5 n=1 Tax=Rhodanobacter denitrificans RepID=M4NTI6_9GAMM
cytochrome c5
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_p_scaffold_3916_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6239..7456
DNA (1218bp) protein (406aa)
Membrane fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFA3_9GAMM rbh
Membrane fusion protein {ECO:0000313|EMBL:EIL98144.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RND family efflux transporter, MFP subunit rbh
SCNpilot_expt_500_p_scaffold_3916_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7541..8620
DNA (1080bp) protein (360aa)
Acriflavin resistance protein D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P1_9GAMM
Acriflavin resistance protein D {ECO:0000313|EMBL:EIL93732.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
Displaying 9 items

View Taxonomy