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SCNpilot_expt_500_p_scaffold_1923

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1923_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15..821
DNA (807bp) protein (269aa)
iron3+ dicitrate transport ATP-binding protein FecE; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
Iron3+ dicitrate transport ATP-binding protein FecE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B9_PELHB rbh
ABC transporter {ECO:0000313|EMBL:KFL30494.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_1923_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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818..1840
DNA (1023bp) protein (341aa)
Iron3+ dicitrate transport system permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B8_PELHB rbh
Iron ABC transporter permease {ECO:0000313|EMBL:KFL30495.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron3+ dicitrate transport system permease protein; K02015 iron complex transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_1923_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1840..2907
DNA (1068bp) protein (356aa)
Iron3+ dicitrate transport system permease protein FecD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B7_PELHB rbh
Ferrichrome ABC transporter permease {ECO:0000313|EMBL:KFL30496.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
iron3+ dicitrate transport system permease protein FecD; K02015 iron complex transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_1923_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2929..3912
DNA (984bp) protein (328aa)
Putative iron compound-binding protein of ABC transporter family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B3_PELHB rbh
putative iron compound-binding protein of ABC transporter family rbh
Putative iron compound-binding protein of ABC transporter family {ECO:0000313|EMBL:AEQ52357.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_500_p_scaffold_1923_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3912..4838
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B2_PELHB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEQ52356.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_500_p_scaffold_1923_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4884..5849
DNA (966bp) protein (322aa)
Putative iron compound-binding protein of ABC transporter family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8B0_PELHB rbh
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KFL30499.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative iron compound-binding protein of ABC transporter family; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_1923_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5896..7404)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU32_RHITR rbh
Putative endoglucanase {ECO:0000313|EMBL:KFC71752.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1923_8
unknown

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7911..8222
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1923_9
unknown

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comp(8223..9083)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1923_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10379..10978
DNA (600bp) protein (200aa)
3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Dna-3-methyladenine glycosylase 1 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRF6_9RHOB
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KFL32620.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_1923_11
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11503..11745)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB79524.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_expt_500_p_scaffold_1923_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11742..12611)
DNA (870bp) protein (290aa)
CaAX amino protease family protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWR3_AZOBR rbh
caAX amino protease family protein rbh
CaAX amino protease family protein {ECO:0000313|EMBL:CCD02322.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_500_p_scaffold_1923_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12620..13243)
DNA (624bp) protein (208aa)
Putative transcriptional regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWR2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIB15355.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative transcriptional regulator
SCNpilot_expt_500_p_scaffold_1923_14
unknown

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comp(13733..13915)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 14 items

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