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SCNpilot_expt_500_p_scaffold_5053

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5053_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..469)
DNA (468bp) protein (156aa)
LysR family transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB23_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08766.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
LysR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_5053_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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621..884
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08765.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5053_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1041..1286)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P847_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKB84106.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
type IV pilus assembly protein PilZ
SCNpilot_expt_500_p_scaffold_5053_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1302..1805)
DNA (504bp) protein (168aa)
Signal recognition particle GTPase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB25_PELHB
Invasion associated locus B {ECO:0000313|EMBL:KFL28165.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
signal recognition particle GTPase
SCNpilot_expt_500_p_scaffold_5053_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2124..3050
DNA (927bp) protein (309aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cytochrome c oxidase polypeptide II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB26_PELHB rbh
SCNpilot_expt_500_p_scaffold_5053_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3075..4769
DNA (1695bp) protein (565aa)
cytochrome c oxidase polypeptide I; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase, subunit I n=1 Tax=Rhizobium sp. RepID=L0NBI2_RHISP
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KKB08773.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5053_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4872..5765
DNA (894bp) protein (298aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
heme O synthase, protoheme IX farnesyltransferase COX10-CtaB; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] rbh
Protoheme IX farnesyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB28_PELHB rbh
SCNpilot_expt_500_p_scaffold_5053_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5768..5947
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB08774.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5053_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5948..6514
DNA (567bp) protein (189aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB30_PELHB
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1; K02258 cytochrome c oxidase assembly protein subunit 11
SCNpilot_expt_500_p_scaffold_5053_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6517..7233
DNA (717bp) protein (239aa)
cytochrome c oxidase polypeptide III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase polypeptide III n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB31_PELHB
Cytochrome B562 {ECO:0000313|EMBL:KFL28160.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Displaying 10 items

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