ggKbase home page

SCNpilot_expt_500_p_scaffold_5590

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5590_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..567)
DNA (567bp) protein (189aa)
Putative transmembrane iron-regulated protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA66_PELHB
Membrane protein {ECO:0000313|EMBL:KKB08366.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative transmembrane iron-regulated protein
SCNpilot_expt_500_p_scaffold_5590_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1100)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDL9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80652.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_5590_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1198..2136)
DNA (939bp) protein (313aa)
L-arabinose 1-dehydrogenase; K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363CAA3 rbh
Galactose 1-dehydrogenase {ECO:0000313|EMBL:KKB08091.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5590_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2222..2584)
DNA (363bp) protein (121aa)
Glyoxalase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REG8_PELHB
Glyoxalase family protein {ECO:0000313|EMBL:KFC64397.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
glyoxalase family protein
SCNpilot_expt_500_p_scaffold_5590_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2643..3899)
DNA (1257bp) protein (419aa)
ttuD; hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81]
UPI0003D0116F related cluster n=1 Tax=unknown RepID=UPI0003D0116F rbh
Hydroxypyruvate reductase {ECO:0000313|EMBL:KKB08089.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5590_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4022..4711
DNA (690bp) protein (230aa)
Phosphonate metabolism protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2Y7_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KKB77806.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
phosphonate metabolism protein
SCNpilot_expt_500_p_scaffold_5590_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4718..5854
DNA (1137bp) protein (379aa)
Metal-dependent hydrolase involved in phosphonate metabolism n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RCE9_9RHIZ
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:KKB08087.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phnM; protein phnM; K06162 PhnM protein rbh
SCNpilot_expt_500_p_scaffold_5590_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5827..6417
DNA (591bp) protein (197aa)
guanylate kinase/L-type calcium channel region; K05774 ribose 1,5-bisphosphokinase [EC:2.7.4.23]
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JSA0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08086.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_5590_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6480..6629
DNA (150bp) protein (50aa)
Membrane protein {ECO:0000313|EMBL:KKC31781.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_expt_500_p_scaffold_5590_10
unknown

Not on your lists

6616..6825
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_5590_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6806..7786)
DNA (981bp) protein (327aa)
UPI0003CE2A41 related cluster n=1 Tax=unknown RepID=UPI0003CE2A41
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB08013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_5590_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7805..8911)
DNA (1107bp) protein (369aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=alpha proteobacterium BAL199 RepID=A8TU04_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08014.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nitrate/sulfonate ABC transporter, permease; K02050 NitT/TauT family transport system permease protein
SCNpilot_expt_500_p_scaffold_5590_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8908..9729)
DNA (822bp) protein (274aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BPU8_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:KKB08015.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
Displaying 13 items

View Taxonomy