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SCNpilot_expt_500_p_scaffold_24638

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_24638_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_24638_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(130..1080)
DNA (951bp) protein (317aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI9_PELHB rbh
SCNpilot_expt_500_p_scaffold_24638_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1982..2833
DNA (852bp) protein (284aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED65_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJE50331.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
diguanylate cyclase
SCNpilot_expt_500_p_scaffold_24638_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2955..3359
DNA (405bp) protein (135aa)
30S ribosomal protein S6 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI5_PELHB
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
SCNpilot_expt_500_p_scaffold_24638_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3378..3632
DNA (255bp) protein (85aa)
30S ribosomal protein S18 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI4_PELHB
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
SCNpilot_expt_500_p_scaffold_24638_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3826..4392
DNA (567bp) protein (189aa)
50S ribosomal protein L9 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGI3_PELHB
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
SCNpilot_expt_500_p_scaffold_24638_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4628..4771
DNA (144bp) protein (48aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F9D74D
DNA helicase {ECO:0000313|EMBL:KKB85781.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Displaying 7 items

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