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SCNpilot_expt_500_p_scaffold_2512

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2512_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z168_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KFL32732.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_2512_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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400..1704
DNA (1305bp) protein (435aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N2R6_9RHIZ rbh
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:KFL32738.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_2512_3
unknown

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1802..2116
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2512_4
unknown

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2110..2235
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2512_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2807..3640
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AQ3_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86533.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_500_p_scaffold_2512_6
unknown

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comp(3712..4116)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2512_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4271..5800
DNA (1530bp) protein (510aa)
peptidase S41 n=1 Tax=Xanthobacteraceae RepID=UPI0003603A8A rbh
fixN; cbb3-type cytochrome c oxidase subunit I rbh
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AFK54117.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_500_p_scaffold_2512_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5810..6544
DNA (735bp) protein (245aa)
ccoO; cytochrome c oxidase, cbb3-type subunit II (EC:1.9.3.1); K00405 cytochrome c oxidase cbb3-type subunit II
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:ACI98686.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACI98686.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
peptidase S41 n=1 Tax=Novispirillum itersonii RepID=UPI0003696DF9
SCNpilot_expt_500_p_scaffold_2512_9
unknown

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6541..6705
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2512_10
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6692..7579
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000369375D rbh
petJ; cytochrome-c oxidase subunit FixP rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_500_p_scaffold_2512_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7576..8982
DNA (1407bp) protein (469aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RTN4_9RHIZ
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation {ECO:0000313|EMBL:ESR26440.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
cytochrome c oxidase cbb3 type accessory protein FixG
SCNpilot_expt_500_p_scaffold_2512_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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8979..9485
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036887FF
FixH family protein {ECO:0000313|EMBL:GAK46455.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
fixH; integral membrane protein linked to a cation pump
SCNpilot_expt_500_p_scaffold_2512_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9482..11572
DNA (2091bp) protein (697aa)
Cation-exporting ATPase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFB7_AZOBR rbh
ATPase P {ECO:0000313|EMBL:AIB10446.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
fixI; cation-exporting ATPase rbh
Displaying 13 items

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