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SCNpilot_expt_500_p_scaffold_2787

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2787_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1049)
DNA (1047bp) protein (349aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ureC; urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5]
Urease subunit alpha n=1 Tax=Nitratireductor indicus C115 RepID=K2NYT1_9RHIZ
SCNpilot_expt_500_p_scaffold_2787_2
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1193..2035
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R678_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEE46965.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
Class I diheme cytochrome c rbh
SCNpilot_expt_500_p_scaffold_2787_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2299..2715)
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB80026.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_500_p_scaffold_2787_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2818..3123)
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
urease subunit beta; K01429 urease subunit beta [EC:3.5.1.5]
Urease subunit beta n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=URE2_MESSB
SCNpilot_expt_500_p_scaffold_2787_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3135..3713)
DNA (579bp) protein (193aa)
HupE-UreJ family metal transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA46_PELHB
Protein hupE {ECO:0000313|EMBL:KFL29040.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
HupE-UreJ family metal transporter; K03192 urease accessory protein
SCNpilot_expt_500_p_scaffold_2787_6
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3726..4028)
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
urease subunit gamma; K01430 urease subunit gamma [EC:3.5.1.5]
Urease subunit gamma n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F4M6_9RHIZ
SCNpilot_expt_500_p_scaffold_2787_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4039..4887)
DNA (849bp) protein (283aa)
Urease accessory protein UreD n=1 Tax=Nitratireductor indicus C115 RepID=K2NUI1_9RHIZ rbh
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
urease accessory protein UreD; K03190 urease accessory protein rbh
SCNpilot_expt_500_p_scaffold_2787_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4965..5291
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC66408.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_expt_500_p_scaffold_2787_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5347..6051)
DNA (705bp) protein (235aa)
Urea ABC transporter ATPase protein UrtE n=1 Tax=Nitratireductor indicus C115 RepID=K2NYS2_9RHIZ rbh
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB80021.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
urea ABC transporter ATPase protein UrtE; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_2787_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6048..6797)
DNA (750bp) protein (250aa)
Urea ABC transporter, ATPase protein UrtD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA50_PELHB rbh
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB80020.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
urea ABC transporter ATPase protein UrtD; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_2787_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6802..8001)
DNA (1200bp) protein (400aa)
Urea ABC transporter, permease protein UrtC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA51_PELHB rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:KKB10033.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
urea ABC transporter, permease protein UrtC; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_2787_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8183..9796)
DNA (1614bp) protein (538aa)
Urea ABC transporter permease UrtB n=1 Tax=Nitratireductor indicus C115 RepID=K2P6X1_9RHIZ rbh
Urea ABC transporter permease {ECO:0000313|EMBL:KKB10032.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
urea or short-chain amide ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_p_scaffold_2787_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9963..10865)
DNA (903bp) protein (301aa)
ABC transporter periplasmic solute-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NUH4_9RHIZ
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL29033.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
urea ABC transporter, urea binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Displaying 13 items

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