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SCNpilot_expt_500_p_scaffold_4548

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4548_1
unknown

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2..301
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4548_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(298..654)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VE11_RHOPX
Uncharacterized protein {ECO:0000313|EMBL:KKC33989.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4548_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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712..1962
DNA (1251bp) protein (417aa)
Phage DNA packaging protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE00_PELHB rbh
Phage DNA packaging protein {ECO:0000313|EMBL:KFC65039.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
phage DNA packaging protein rbh
SCNpilot_expt_500_p_scaffold_4548_4

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comp(1959..2378)
DNA (420bp) protein (140aa)
PilT protein n=1 Tax=mine drainage metagenome RepID=T0ZPP9_9ZZZZ
PilT protein {ECO:0000313|EMBL:EQD46482.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
stbB; plasmid stability protein StbB; K07062
SCNpilot_expt_500_p_scaffold_4548_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2379..2675)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ERX9_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT98475.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCNpilot_expt_500_p_scaffold_4548_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2747..3913
DNA (1167bp) protein (389aa)
Phage portal protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE01_PELHB rbh
Portal protein {ECO:0000313|EMBL:KKB09033.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage portal protein rbh
SCNpilot_expt_500_p_scaffold_4548_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4807..5457
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29363.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_4548_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5533..5721
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003610D37
Uncharacterized protein {ECO:0000313|EMBL:KKB09034.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4548_9
unknown

Not on your lists

5726..5863
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4548_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5863..6342
DNA (480bp) protein (160aa)
Phage prohead protease, HK97 family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE04_PELHB
Peptidase U35 {ECO:0000313|EMBL:KKB09035.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage prohead protease, HK97 family; K06904
SCNpilot_expt_500_p_scaffold_4548_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6355..7575
DNA (1221bp) protein (407aa)
Phage major capsid protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE05_PELHB rbh
Capsid protein {ECO:0000313|EMBL:KKB09036.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage major capsid protein rbh
SCNpilot_expt_500_p_scaffold_4548_12
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7639..7815)
DNA (177bp) protein (59aa)
alkaline phosphatase (EC:3.1.3.1); K01077 alkaline phosphatase [EC:3.1.3.1]
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037CCC77
Alkaline phosphatase {ECO:0000313|EMBL:ADO41228.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
Displaying 12 items

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