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SCNpilot_expt_500_p_scaffold_3227

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3227_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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66..728
DNA (663bp) protein (221aa)
haloacid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] rbh
Haloacid dehalogenase-like hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR5_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08176.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_3227_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(805..1200)
DNA (396bp) protein (132aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XDW6_9RHIZ
Lactoylglutathione lyase {ECO:0000313|EMBL:KKB08175.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_3227_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1224..1865)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
upp; hypothetical protein; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHN2_MOBAS
SCNpilot_expt_500_p_scaffold_3227_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1891..3108)
DNA (1218bp) protein (406aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
phosphopentomutase; K01839 phosphopentomutase [EC:5.4.2.7] rbh
Phosphopentomutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR3_PELHB rbh
SCNpilot_expt_500_p_scaffold_3227_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3202..4524)
DNA (1323bp) protein (441aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Thymidine phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR2_PELHB rbh
SCNpilot_expt_500_p_scaffold_3227_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4668..7034)
DNA (2367bp) protein (789aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Aldehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR0_PELHB rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KFL31010.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_p_scaffold_3227_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7191..8180)
DNA (990bp) protein (330aa)
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] rbh
Deoxyribose-phosphate aldolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ9_PELHB rbh
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:KKB08169.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_p_scaffold_3227_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8177..8971)
DNA (795bp) protein (265aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] rbh
Purine nucleoside phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ8_PELHB rbh
SCNpilot_expt_500_p_scaffold_3227_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8968..9378)
DNA (411bp) protein (137aa)
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFQ7_PELHB
Cytidine deaminase {ECO:0000313|EMBL:KFC61327.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_expt_500_p_scaffold_3227_10
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9401..9823)
DNA (423bp) protein (141aa)
Sugar ABC transporter, permease protein n=2 Tax=Pseudovibrio RepID=G8PSC5_PSEUV
Putative nucleoside ABC transporter, permease 2 component {ECO:0000313|EMBL:KFC61328.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
sugar ABC transporter permease; K02057 simple sugar transport system permease protein
Displaying 10 items

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