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SCNpilot_expt_500_p_scaffold_3399

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3399_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(529..1572)
DNA (1044bp) protein (348aa)
Deblocking aminopeptidase / cyanophycinase 2 n=1 Tax=Providencia stuartii (strain MRSN 2154) RepID=I0DVN3_PROSM rbh
Peptidase M42 {ECO:0000313|EMBL:KKB08964.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
deblocking aminopeptidase / cyanophycinase 2 rbh
SCNpilot_expt_500_p_scaffold_3399_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1569..2357)
DNA (789bp) protein (263aa)
Transcriptional regulator, GntR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Y1_PELHB rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB08965.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
GntR family transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_3399_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2354..3157)
DNA (804bp) protein (268aa)
Dipeptide transport ATP-binding protein DppF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Y2_PELHB rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB08966.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dipeptide transport ATP-binding protein DppF; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_3399_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3154..4941)
DNA (1788bp) protein (596aa)
Putative dipeptide ABC transporter permease and ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Y3_PELHB rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KKB08967.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative dipeptide ABC transporter permease and ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_3399_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4938..5885)
DNA (948bp) protein (316aa)
Dipeptide transport system permease protein DppB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Y4_PELHB rbh
Glutathione ABC transporter permease {ECO:0000313|EMBL:KKB08968.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dipeptide transport system permease DppB; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_3399_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6043..7611)
DNA (1569bp) protein (523aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Y5_PELHB rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB79247.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
dipeptide-binding ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_3399_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7743..8384
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI0003480B2E
Uncharacterized protein {ECO:0000313|EMBL:KKB79246.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3399_8
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8542..9501
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F1D86 rbh
nickel ABC transporter substrate-binding protein; K15584 nickel transport system substrate-binding protein rbh
Nickel ABC transporter, periplasmic nickel-binding {ECO:0000313|EMBL:ABC23077.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Displaying 8 items

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