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SCNpilot_expt_500_p_scaffold_8300

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_8300_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..525
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KL80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54395.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_8300_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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592..960
DNA (369bp) protein (123aa)
CheY-like receiver domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EQG5_9BURK
CheY-like receiver domain-containing protein {ECO:0000313|EMBL:EJE54394.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
SCNpilot_expt_500_p_scaffold_8300_3
unknown

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comp(1401..1679)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_8300_4
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1702..2247
DNA (546bp) protein (182aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:ACK52807.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ACK52807.1};; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZIB3_THASP
SCNpilot_expt_500_p_scaffold_8300_5
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2064..3182)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003678CFF
Uncharacterized protein {ECO:0000313|EMBL:KJS29354.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
primase 2
SCNpilot_expt_500_p_scaffold_8300_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3363..3590
DNA (228bp) protein (76aa)
Sulfur transfer protein id=5082242 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_p_scaffold_8300_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3595..4392
DNA (798bp) protein (266aa)
Thiazole synthase id=1268705 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
thiazole biosynthesis family protein; K03149 thiamine biosynthesis ThiG rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_p_scaffold_8300_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4435..4662)
DNA (228bp) protein (76aa)
SirA-like domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TV21_ALIDB
sira-like domain-containing protein
Redox protein {ECO:0000313|EMBL:GAO23947.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_p_scaffold_8300_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4683..5234)
DNA (552bp) protein (184aa)
NUDIX hydrolase id=12551029 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
NUDIX hydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_8300_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5314..6117)
DNA (804bp) protein (268aa)
cysM; cysteine synthase B (EC:2.5.1.47) id=12551030 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cysM; cysteine synthase B (EC:2.5.1.47)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 10 items

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