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SCNpilot_expt_500_p_scaffold_2395

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2395_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)
hypothetical protein id=12551186 bin=BDI species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158..4321)
DNA (4164bp) protein (1388aa)
cobN; cobaltochelatase subunit CobN (EC:6.6.1.2); K02230 cobaltochelatase CobN [EC:6.6.1.2] rbh
CobN/magnesium chelatase id=1270155 bin=GWE1_Burkholderiales_65_30 species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4323..5066)
DNA (744bp) protein (248aa)
Ferric siderophore transport system, periplasmic binding protein TonB id=12551184 bin=BDI species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferric siderophore transport system, periplasmic binding protein TonB; K03832 periplasmic protein TonB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5063..5431)
DNA (369bp) protein (123aa)
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD id=12551183 bin=BDI species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=BDI organism_group=Betaproteobacteria
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5434..5859)
DNA (426bp) protein (142aa)
Biopolymer transport protein exbB id=1270152 bin=GWE1_Burkholderiales_65_30 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
exbB; biopolymer transport protein Exbb; K03561 biopolymer transport protein ExbB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5875..8148)
DNA (2274bp) protein (758aa)
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein id=12551181 bin=BDI species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tonb-dependent receptor rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8326..8712)
DNA (387bp) protein (129aa)
id=12551180 bin=BDI tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8787..9860)
DNA (1074bp) protein (358aa)
phage integrase family protein id=12551179 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tyrosine recombinase XerC; K03733 integrase/recombinase XerC rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9918..10637)
DNA (720bp) protein (240aa)
hypothetical protein id=12551178 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10634..11512)
DNA (879bp) protein (293aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7) id=12551177 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2395_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11572..11913
DNA (342bp) protein (114aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase domain-containing protein; K11209 GST-like protein id=12551176 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 11 items

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