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SCNpilot_expt_500_p_scaffold_2537

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2537_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..248)
DNA (246bp) protein (82aa)
Flagellar transcriptional activator FlhC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APB6_DELSC
Flagellar transcriptional activator FlhC {ECO:0000313|EMBL:GAO20685.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
flagellar transcriptional activator FlhC
SCNpilot_expt_500_p_scaffold_2537_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..588)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APB7_DELSC
Uncharacterized protein {ECO:0000313|EMBL:GAO20686.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2537_3
unknown

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comp(1052..1333)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_2537_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1692..2753)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APB9_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO20688.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2537_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..4082)
DNA (1017bp) protein (339aa)
P4 alpha zinc-binding domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APC0_DELSC rbh
P4 alpha zinc-binding domain-containing protein {ECO:0000313|EMBL:GAO20689.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
P4 alpha zinc-binding domain-containing protein; K06919 putative DNA primase/helicase rbh
SCNpilot_expt_500_p_scaffold_2537_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4227..4535)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APC1_DELSC
Uncharacterized protein {ECO:0000313|EMBL:GAO20690.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2537_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4532..4744)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO20691.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_p_scaffold_2537_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4798..5361)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APC3_DELSC
Uncharacterized protein {ECO:0000313|EMBL:GAO20692.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2537_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5839..6804
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APC4_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO20693.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_2537_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7003..7353)
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=2 Tax=Delftia RepID=A9C016_DELAS
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:GAO20694.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RNP-1 like RNA-binding protein
SCNpilot_expt_500_p_scaffold_2537_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7465..7740)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWZ1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO20695.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2537_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8493..8723
DNA (231bp) protein (77aa)
Prophage CP4-57 regulatory n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APC5_DELSC
Prophage CP4-57 regulatory {ECO:0000313|EMBL:GAO20696.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
prophage CP4-57 regulatory
SCNpilot_expt_500_p_scaffold_2537_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8952..9779
DNA (828bp) protein (276aa)
suhB1; inositol-1-monophosphatase (EC:3.1.3.25) rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EJ86_9BURK rbh
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:GAO20697.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_p_scaffold_2537_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9845..10855)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000368AEBC
Putative AraC-family transcriptional regulator {ECO:0000313|EMBL:GAO20698.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
AraC family transcriptional regulator
SCNpilot_expt_500_p_scaffold_2537_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11550..12704
DNA (1155bp) protein (385aa)
Putative pigment production hydroxylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ88_9SPHN rbh
Putative pigment production hydroxylase {ECO:0000313|EMBL:GAO20699.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
pigment production hydroxylase
SCNpilot_expt_500_p_scaffold_2537_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13300..13950
DNA (651bp) protein (217aa)
Acyl-CoA dehydrogenase type 2 domain n=1 Tax=Burkholderia sp. H160 RepID=B5WFI0_9BURK
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:GAO20700.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
putative dehydrogenase/hydroxylase
SCNpilot_expt_500_p_scaffold_2537_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14044..14565
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IV76_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO20701.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
flavin reductase domain-containing protein
SCNpilot_expt_500_p_scaffold_2537_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..15262
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RSC9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAO20702.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
glutathione S-transferase
SCNpilot_expt_500_p_scaffold_2537_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15317..15703
DNA (387bp) protein (129aa)
Putative membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LGG7_9BURK
Putative membrane protein {ECO:0000313|EMBL:GAO20703.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
DoxX; K15977 putative oxidoreductase
SCNpilot_expt_500_p_scaffold_2537_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15741..16562
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPP6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAO20704.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_2537_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16667..17242
DNA (576bp) protein (192aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
rutE; putative NADH dehydrogenase/NAD(P)H nitroreductase RutE; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Putative NADH dehydrogenase/NAD(P)H nitroreductase RGE_36840 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVI6_RUBGI
Displaying 21 items

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