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SCNpilot_expt_500_p_scaffold_2756

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_2756_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1398)
DNA (1398bp) protein (466aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase id=12549835 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_2756_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1514..2380)
DNA (867bp) protein (289aa)
Helix-turn-helix-domain containing protein AraC type n=2 Tax=Alicycliphilus denitrificans RepID=E8U186_ALIDB rbh
AraC family transcriptional regulator rbh
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ADV01139.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_p_scaffold_2756_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2478..3023
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Uncharacterized peroxidase-related enzyme n=2 Tax=Alicycliphilus denitrificans RepID=E8U185_ALIDB
uncharacterized peroxidase-related enzyme
SCNpilot_expt_500_p_scaffold_2756_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3035..3889)
DNA (855bp) protein (285aa)
Condensin subunit ScpA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX14_9BURK
condensin subunit ScpA
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_500_p_scaffold_2756_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3958..4167)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0T5_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24756.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_p_scaffold_2756_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4248..5906)
DNA (1659bp) protein (553aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBH6_ACISJ rbh
hypothetical protein rbh
Thiamine pyrophosphate enzyme domain protein TPP-binding protein {ECO:0000313|EMBL:ABM43601.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_p_scaffold_2756_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5968..7575)
DNA (1608bp) protein (536aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBH4_ACISJ rbh
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K07077 rbh
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ABM43599.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_p_scaffold_2756_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7671..8660
DNA (990bp) protein (330aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CEAE1 rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:GAD23623.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
AraC family transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_2756_9
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8736..9380)
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD4_RHOFD rbh
two component LuxR family transcriptional regulator; K11712 two-component system, LuxR family, response regulator DctR rbh
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
SCNpilot_expt_500_p_scaffold_2756_10
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9377..10948)
DNA (1572bp) protein (524aa)
multi-sensor signal transduction histidine kinase; K11711 two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD5_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
Displaying 10 items

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