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SCNpilot_expt_500_p_scaffold_3859

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3859_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1260)
DNA (1260bp) protein (420aa)
long-chain-fatty-acid CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase id=1268872 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_p_scaffold_3859_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1257..2432)
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Thiolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB1_RHOFD rbh
Thiolase {ECO:0000313|EMBL:ABD70992.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
SCNpilot_expt_500_p_scaffold_3859_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2608..3177)
DNA (570bp) protein (190aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377FDD
LuxR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_500_p_scaffold_3859_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3299..4738
DNA (1440bp) protein (480aa)
Aldehyde dehydrogenase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9E6_ACIDE rbh
aldehyde dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_3859_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4881..5399
DNA (519bp) protein (173aa)
N-acetyltransferase GCN5 id=12552510 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_3859_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5577..6725
DNA (1149bp) protein (383aa)
methyltransferase small id=12552509 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methyltransferase small rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_3859_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6694..6900)
DNA (207bp) protein (69aa)
hypothetical protein id=12552508 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_p_scaffold_3859_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7281..7649
DNA (369bp) protein (123aa)
Uncharacterized protein id=1274322 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_500_p_scaffold_3859_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7844..8713
DNA (870bp) protein (290aa)
Extracellular solute-binding protein family 3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5N9_ACIDE rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:EER60212.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ABC transporter substrate-binding protein; K10005 glutamate transport system substrate-binding protein
Displaying 9 items

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