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SCNpilot_expt_500_p_scaffold_5208

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5208_1
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..514)
DNA (513bp) protein (171aa)
Rod shape-determining protein mreC n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZP0_FLAB3
Rod shape-determining protein MreC {ECO:0000313|EMBL:KFC24456.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
SCNpilot_expt_500_p_scaffold_5208_2
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(601..1626)
DNA (1026bp) protein (342aa)
Rod shape-determining protein mreB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZN9_FLAB3 rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:KFC23899.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins rbh
SCNpilot_expt_500_p_scaffold_5208_3
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1904..3193
DNA (1290bp) protein (430aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Glutamyl-tRNA reductase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVA6_9FLAO
hypothetical protein
SCNpilot_expt_500_p_scaffold_5208_4
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3162..4070
DNA (909bp) protein (303aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Porphobilinogen deaminase n=4 Tax=Riemerella anatipestifer RepID=F0TMI7_RIEAR rbh
Porphobilinogen deaminase rbh
SCNpilot_expt_500_p_scaffold_5208_5
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4193..4882
DNA (690bp) protein (230aa)
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen-III synthase, divergent, Flavobacterial type n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZF6_FLAB3
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KFC24452.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_expt_500_p_scaffold_5208_6
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5023..6048
DNA (1026bp) protein (342aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Uroporphyrinogen-III decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
Uroporphyrinogen decarboxylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVA3_9FLAO rbh
SCNpilot_expt_500_p_scaffold_5208_7
unknown

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comp(6082..6345)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_5208_8
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6443..6931)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VV63_9FLAO
Fe-S-oxidoreductase {ECO:0000313|EMBL:KFC24448.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein; K06940
Displaying 8 items

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