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SCNpilot_expt_500_p_scaffold_3931

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3931_1
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..281
DNA (279bp) protein (93aa)
PREDICTED: DNA mismatch repair protein MutS-like n=1 Tax=Solanum lycopersicum RepID=UPI0002BCA348
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
DNA mismatch repair protein MutS-like
SCNpilot_expt_500_p_scaffold_3931_2
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(282..491)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC24164.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_expt_500_p_scaffold_3931_3
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(508..909)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X307_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08820.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_500_p_scaffold_3931_4
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1517..1849)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X359_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC23629.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3931_5
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1891..3102)
DNA (1212bp) protein (404aa)
Flavoprotein family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUZ3_9FLAO rbh
Flavoprotein {ECO:0000313|EMBL:KFC23630.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein; K07007 rbh
SCNpilot_expt_500_p_scaffold_3931_6
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3277..3780
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R715_RIEAN
Thioesterase {ECO:0000313|EMBL:KFC23631.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3931_7
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3846..4901
DNA (1056bp) protein (352aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
Thiamine-monophosphate kinase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUZ5_9FLAO rbh
SCNpilot_expt_500_p_scaffold_3931_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4950..5756
DNA (807bp) protein (269aa)
Peptidase, M48 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX57_9FLAO rbh
Peptidase M48 {ECO:0000313|EMBL:KFC23633.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_3931_9
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5792..6061
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8KA06_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC23634.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3931_10
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6058..6903)
DNA (846bp) protein (282aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KLE0_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KFC23635.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
AraC family transcriptional regulator
SCNpilot_expt_500_p_scaffold_3931_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7119..7784)
DNA (666bp) protein (222aa)
Outer membrane insertion signal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX55_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC24178.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3931_12
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7774..8601)
DNA (828bp) protein (276aa)
ABC transporter related n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZR2_FLAB3 rbh
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC23637.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
ABC transporter; K02065 putative ABC transport system ATP-binding protein rbh
Displaying 12 items

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