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SCNpilot_expt_500_p_scaffold_9597

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_9597_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..176)
DNA (174bp) protein (58aa)
Cytochrome c n=2 Tax=Oligotropha carboxidovorans RepID=B6JJE3_OLICO
cytochrome c -like protein; K08738 cytochrome c
Cytochrome c {ECO:0000313|EMBL:AEI05421.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_p_scaffold_9597_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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426..1169
DNA (744bp) protein (248aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] rbh
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUY7_9BRAD rbh
SCNpilot_expt_500_p_scaffold_9597_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1169..2032
DNA (864bp) protein (288aa)
Prephenate dehydratase {ECO:0000313|EMBL:EFI52639.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EFI52639.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
pheA; prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] rbh
Prephenate dehydratase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3V9_9BRAD rbh
SCNpilot_expt_500_p_scaffold_9597_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2137..3150)
DNA (1014bp) protein (338aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQS7_AFIFE rbh
putative N5,N10-methylene rbh
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EKS30764.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_expt_500_p_scaffold_9597_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3496..4404
DNA (909bp) protein (303aa)
metF; 5,10-methylenetetrahydrofolate reductase MetF (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] rbh
5,10-methylenetetrahydrofolate reductase MetF {ECO:0000313|EMBL:AEI05417.1}; EC=1.5.1.20 {ECO:0000313|EMBL:AEI05417.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Methylenetetrahydrofolate reductase n=2 Tax=Oligotropha carboxidovorans RepID=B6JJE7_OLICO rbh
Displaying 5 items

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