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SCNpilot_expt_500_p_scaffold_6100

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6100_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..622
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003778C42
hypothetical protein
Putative transmembran protein {ECO:0000313|EMBL:AEI06899.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_p_scaffold_6100_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(608..886)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036D98AD
Uncharacterized protein {ECO:0000313|EMBL:CCD95549.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_6100_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1061..2569
DNA (1509bp) protein (503aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Afipia birgiae RepID=UPI0002FF4BB6 rbh
sugar transferase rbh
Sugar transferase {ECO:0000313|EMBL:ABE63808.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_p_scaffold_6100_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2675..3046)
DNA (372bp) protein (124aa)
histidinol phosphate phosphatase n=1 Tax=Afipia birgiae RepID=UPI0002FE76B7
histone-like nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
Histone-like nucleoid-structuring protein H-NS {ECO:0000313|EMBL:ABE63810.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_p_scaffold_6100_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3644..4021
DNA (378bp) protein (126aa)
Histone-like nucleoid-structuring protein H-NS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIY6_NITHX
histone-like nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
Histone-like nucleoid-structuring protein H-NS {ECO:0000313|EMBL:ABE63811.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_p_scaffold_6100_6
unknown

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4090..4587
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037D2C12
SCNpilot_expt_500_p_scaffold_6100_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4721..5722)
DNA (1002bp) protein (334aa)
rfaC; lipopolysaccharide heptosyltransferase 1 (EC:2.-.-.-); K02841 heptosyltransferase I [EC:2.4.-.-] rbh
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI000315424E rbh
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:EKS27504.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_expt_500_p_scaffold_6100_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5885..6322
DNA (438bp) protein (146aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABA04327.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABA04327.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
UDP-galactose 4-epimerase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3STR4_NITWN
Displaying 8 items

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