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SCNpilot_expt_500_p_scaffold_11673

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_11673_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..628)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P687_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38107.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase M23B
SCNpilot_expt_500_p_scaffold_11673_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(745..1395)
DNA (651bp) protein (217aa)
pcm; protein-L-isoaspartate O-methyltransferase Pcm (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Short=PIMT {ECO:0000255|HAMAP-Rule:MF_00090};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oli
Protein-L-isoaspartate O-methyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=PIMT_OLICO rbh
SCNpilot_expt_500_p_scaffold_11673_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1564..1950
DNA (387bp) protein (129aa)
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9H2_9BRAD
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:CEG07954.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator receiver domain-containing protein
SCNpilot_expt_500_p_scaffold_11673_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1985..2761)
DNA (777bp) protein (259aa)
surE; stationary phase survival protein SurE (EC:3.1.3.5 3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] rbh
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
5'-nucleotidase SurE n=2 Tax=Oligotropha carboxidovorans RepID=SURE_OLICO rbh
SCNpilot_expt_500_p_scaffold_11673_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2883..3962)
DNA (1080bp) protein (360aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Serine--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=SYS_OLICO rbh
Displaying 5 items

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