ggKbase home page

SCNpilot_expt_500_p_scaffold_4282

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_4282_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
Sulfite dehydrogenase cytochrome subunit SoxD n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKM4_9BRAD
Sulfite dehydrogenase cytochrome subunit SoxD {ECO:0000313|EMBL:EGP08393.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
sulfite oxidase cytochrome subunit SoxD
SCNpilot_expt_500_p_scaffold_4282_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(493..1773)
DNA (1281bp) protein (427aa)
Sulfur dehydrogenase subunit SoxC {ECO:0000313|EMBL:ABJ07009.1}; EC=1.-.-.- {ECO:0000313|EMBL:ABJ07009.1};; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Sulfur dehydrogenase subunit SoxC n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M25_RHOP5 rbh
molybdopterin binding oxidoreductase rbh
SCNpilot_expt_500_p_scaffold_4282_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1849..3549)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PIS2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42557.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
twin-arginine translocation pathway signal rbh
SCNpilot_expt_500_p_scaffold_4282_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..3973)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGN0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41782.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sulfur oxidation protein SoxZ
SCNpilot_expt_500_p_scaffold_4282_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4019..4483)
DNA (465bp) protein (155aa)
sulfur oxidation protein SoxY n=1 Tax=Afipia birgiae RepID=UPI00031E8FA8
Uncharacterized protein {ECO:0000313|EMBL:EKS42177.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sulfur oxidation protein SoxY
SCNpilot_expt_500_p_scaffold_4282_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4670..5491
DNA (822bp) protein (274aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SoxAX cytochrome complex subunit A n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQI9_9BRAD rbh
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_4282_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5503..6156
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLY9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41779.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4282_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6194..6697
DNA (504bp) protein (168aa)
hypothetical protein, partial n=1 Tax=Afipia birgiae RepID=UPI000371F650
Uncharacterized protein {ECO:0000313|EMBL:EKS42552.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4282_9
unknown

Not on your lists

comp(6694..6783)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_4282_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6826..7407)
DNA (582bp) protein (194aa)
Thioredoxin SoxW n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKL4_9BRAD rbh
Thioredoxin SoxW {ECO:0000313|EMBL:EGP08383.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_4282_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7447..8109)
DNA (663bp) protein (221aa)
cytochrome C biogenesis protein n=1 Tax=Afipia birgiae RepID=UPI00037A094B rbh
Sulfur oxidation protein SoxV {ECO:0000313|EMBL:EGP08382.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein rbh
Displaying 11 items

View Taxonomy