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SCNpilot_expt_500_p_scaffold_7866

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_7866_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..401
DNA (399bp) protein (133aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211V3_RHOPB
Peptidase M24 {ECO:0000313|EMBL:ABD88833.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_500_p_scaffold_7866_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(553..2703)
DNA (2151bp) protein (717aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] rbh
DNA ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2Z1_9BRAD rbh
SCNpilot_expt_500_p_scaffold_7866_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2715..4388)
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZS3_9BRAD rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
recN; DNA repair protein; K03631 DNA repair protein RecN (Recombination protein N) rbh
SCNpilot_expt_500_p_scaffold_7866_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4400..5287)
DNA (888bp) protein (296aa)
Outer membrane protein assembly factor BamD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2S3_9BRAD rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
yfiO; outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein rbh
Displaying 4 items

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