ggKbase home page

SCNpilot_expt_500_p_scaffold_9014

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_9014_1
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1148
DNA (1146bp) protein (382aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VD94_9PROT rbh
methylthioribose-1-phosphate isomerase rbh
SCNpilot_expt_500_p_scaffold_9014_2
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1145..1882
DNA (738bp) protein (246aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17); K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
L-fuculose phosphate aldolase {ECO:0000313|EMBL:EXI82189.1}; EC=4.1.2.17 {ECO:0000313|EMBL:EXI82189.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Putative L-fuculose phosphate aldolase protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z9I7_9SYNE
SCNpilot_expt_500_p_scaffold_9014_3
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1879..4704)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HZM1_9BURK
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
excinuclease ABC subunit A
SCNpilot_expt_500_p_scaffold_9014_4
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4747..5403
DNA (657bp) protein (219aa)
Putative transport protein (MFS family) n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGI0_COLFT
putative transport protein (MFS family)
Putative transport protein (MFS family) {ECO:0000313|EMBL:AEK60310.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Displaying 4 items

View Taxonomy