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SCNpilot_expt_500_p_scaffold_5004

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5004_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..713)
DNA (711bp) protein (237aa)
Putative cytochrome c n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDS7_METPP
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:ABM93716.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_expt_500_p_scaffold_5004_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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961..1203
DNA (243bp) protein (81aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1V7_AZOSB
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL92812.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCNpilot_expt_500_p_scaffold_5004_3
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1225..1905)
DNA (681bp) protein (227aa)
fructose-2,6-bisphosphatase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00031B19E8
Phosphoglycerate / bisphosphoglycerate mutase {ECO:0000313|EMBL:EKZ98199.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
phosphoglycerate / bisphosphoglycerate mutase
SCNpilot_expt_500_p_scaffold_5004_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2115..3293
DNA (1179bp) protein (393aa)
pobA; 4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2); K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EAU64077.1}; EC=1.14.13.2 {ECO:0000313|EMBL:EAU64077.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036F24DB
SCNpilot_expt_500_p_scaffold_5004_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3383..4633
DNA (1251bp) protein (417aa)
acyl-CoA transferase id=1269044 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
acyl-CoA transferase rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_500_p_scaffold_5004_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4728..5369
DNA (642bp) protein (214aa)
TetR family transcriptional regulator id=5081806 bin=GWF1_Burkholderiales_GWF1_66_17 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
transcriptional regulator, TetR family
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_expt_500_p_scaffold_5004_7
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5432..6631)
DNA (1200bp) protein (400aa)
putative fatty acid-CoA racemase; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4]
carnitine dehydratase n=1 Tax=Cupriavidus sp. WS RepID=UPI00036BD9EA
Carnitine dehydratase {ECO:0000313|EMBL:KJK22760.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_expt_500_p_scaffold_5004_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6661..7281)
DNA (621bp) protein (207aa)
mandelate racemase n=1 Tax=Saccharomonospora halophila RepID=UPI0003644D90 rbh
mandelate racemase
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 8 items

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