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SCNpilot_expt_500_p_scaffold_5564

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_5564_1
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2057)
DNA (2055bp) protein (685aa)
rnb; hypothetical protein; K01147 exoribonuclease II [EC:3.1.13.1] rbh
RNB-like protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYD5_9BURK rbh
RNB-like protein {ECO:0000313|EMBL:EFV94539.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
SCNpilot_expt_500_p_scaffold_5564_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2179..2919)
DNA (741bp) protein (247aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Polaromonas sp. CF318 RepID=J2TTC6_9BURK
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EJL81992.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
SCNpilot_expt_500_p_scaffold_5564_3
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2916..3557)
DNA (642bp) protein (214aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T2A9_JANMA
hypothetical protein; K07000
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR89919.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_expt_500_p_scaffold_5564_4
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3568..4938)
DNA (1371bp) protein (457aa)
mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-); K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYD6_9BURK rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:EFV94540.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
SCNpilot_expt_500_p_scaffold_5564_5
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4974..5564
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYD8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV94542.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_5564_6
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5561..6088
DNA (528bp) protein (176aa)
Alkyl hydroperoxide reductase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GFQ7_9BURK
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ESH87050.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
resA; thioredoxin-related transmembrane protein
SCNpilot_expt_500_p_scaffold_5564_7
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6204..6677
DNA (474bp) protein (158aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003616B21
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_expt_500_p_scaffold_5564_8
unknown

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6682..6765
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 8 items

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