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SCNpilot_expt_500_p_scaffold_6323

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6323_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..2029)
DNA (2028bp) protein (676aa)
valS; valyl-trna synthetase (valine--trna ligase) protein; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
Valine--tRNA ligase n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZC7_RALS8
SCNpilot_expt_500_p_scaffold_6323_2
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2089..2511)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXH7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV94973.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
SCNpilot_expt_500_p_scaffold_6323_3
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2508..2930)
DNA (423bp) protein (141aa)
holC; DNA polymerase III chi subunit (EC:2.7.7.7)
DNA polymerase III subunit chi n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RT68_9RALS
DNA polymerase III subunit chi {ECO:0000313|EMBL:EPX96911.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
SCNpilot_expt_500_p_scaffold_6323_4
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2934..4415)
DNA (1482bp) protein (494aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMAP-Rule:MF_00181};; EC=3.4.11.10 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucyl aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BD828 rbh
SCNpilot_expt_500_p_scaffold_6323_5
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4478..5569
DNA (1092bp) protein (364aa)
Permease, YjgP/YjgQ family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXH4_9BURK rbh
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EFV94970.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein; K07091 lipopolysaccharide export system permease protein rbh
SCNpilot_expt_500_p_scaffold_6323_6
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5583..6164
DNA (582bp) protein (194aa)
Putative Membrane protein; putative permease n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZI6_9BURK
Putative Membrane protein putative permease {ECO:0000313|EMBL:EGF31985.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
hypothetical protein; K11720 lipopolysaccharide export system permease protein
Displaying 6 items

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