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SCNpilot_expt_500_p_scaffold_3200

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3200_1
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..816
DNA (816bp) protein (272aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13LT4_BURXL rbh
branched chain amino acid ABC transporter inner membrane protein; K01998 branched-chain amino acid transport system permease protein rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE34955.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_expt_500_p_scaffold_3200_2
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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819..1571
DNA (753bp) protein (251aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13LT5_BURXL rbh
branched chain amino acid ABC transporter ATPase rbh
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE34954.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_expt_500_p_scaffold_3200_3
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1564..2280
DNA (717bp) protein (239aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13LT6_BURXL rbh
branched chain amino acid ABC transporter ATPase rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE34953.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_expt_500_p_scaffold_3200_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2295..3446
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0URP0_ALCFA rbh
hypothetical protein; K09788 hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_500_p_scaffold_3200_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3443..3970)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003653DBE
peptidoglycan-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_expt_500_p_scaffold_3200_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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4285..4605
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q1I8_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU73717.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_expt_500_p_scaffold_3200_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4702..5073
DNA (372bp) protein (124aa)
Photosystem reaction center subunit H n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHR9_9RHIZ
Photosystem reaction center subunit H {ECO:0000313|EMBL:AHB49600.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3200_8
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5444..6682
DNA (1239bp) protein (413aa)
Integrase family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHV7_GALCS
integrase family protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_expt_500_p_scaffold_3200_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6679..7242
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SH65_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98024.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_p_scaffold_3200_10
unknown

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7461..7619
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_3200_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7620..8861
DNA (1242bp) protein (414aa)
Putative phage-related protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VBQ1_PSEA7 rbh
Putative phage-related protein {ECO:0000313|EMBL:GAO22183.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
putative phage-like protein rbh
SCNpilot_expt_500_p_scaffold_3200_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8861..9370
DNA (510bp) protein (170aa)
peptidase U35 n=1 Tax=Brachymonas chironomi RepID=UPI00037AC2B1
Phage prohead protease, HK97 family protein {ECO:0000313|EMBL:GAO23427.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
phage prohead protease, HK97 family protein; K06904
SCNpilot_expt_500_p_scaffold_3200_13
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9367..9891
DNA (525bp) protein (175aa)
Phage portal protein, HK97 family n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZG8_BURCC
HK97 family phage portal protein
Phage portal protein, HK97 family {ECO:0000313|EMBL:ACA90461.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
Displaying 13 items

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