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SCNpilot_expt_500_p_scaffold_3764

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3764_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..650)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003756D37
Uncharacterized protein {ECO:0000313|EMBL:KJC48770.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_expt_500_p_scaffold_3764_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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740..2203
DNA (1464bp) protein (488aa)
NADH:flavin oxidoreductase, old yellow enzyme family n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KT97_9GAMM rbh
NADH oxidase rbh
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_500_p_scaffold_3764_3
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2242..2565
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2G9Z4_9BURK
Ferredoxin {ECO:0000313|EMBL:ESH87682.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
fdxA; ferredoxin protein; K05524 ferredoxin
SCNpilot_expt_500_p_scaffold_3764_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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2567..6181
DNA (3615bp) protein (1205aa)
Glutamate synthase [NADPH] small chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ1_9PROT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_500_p_scaffold_3764_5
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6274..7575
DNA (1302bp) protein (434aa)
polyhydroxyalkanoate depolymerase, intracellular; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JE64_BURP8
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:ACC71272.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_expt_500_p_scaffold_3764_6
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7572..8078
DNA (507bp) protein (169aa)
rnfB; ferredoxin (EC:1.6.5.-); K03616 electron transport complex protein RnfB
Predicted NADH:ubiquinone oxidoreductase,subunit RnfB {ECO:0000313|EMBL:CAJ92289.1}; EC=1.6.5.- {ECO:0000313|EMBL:CAJ92289.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Predicted NADH:ubiquinone oxidoreductase,subunit RnfB n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KCI2_CUPNH
SCNpilot_expt_500_p_scaffold_3764_7
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8075..8731
DNA (657bp) protein (219aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
hypothetical protein n=1 Tax=Thioalkalivibrio sp. HL-Eb18 RepID=UPI00036FE6A0
SCNpilot_expt_500_p_scaffold_3764_8
unknown

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8783..8869
DNA (87bp) protein (29aa)

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Displaying 8 items

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