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SCNpilot_expt_500_p_scaffold_3789

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3789_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..1902
DNA (1902bp) protein (634aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase, alpha subunit n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q604G7_METCA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_500_p_scaffold_3789_2
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1877..3049)
DNA (1173bp) protein (391aa)
acd4; acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
Putative acyl-CoA dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1P6_BORPD rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_expt_500_p_scaffold_3789_3
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3179..3925
DNA (747bp) protein (249aa)
alcohol dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] rbh
Putative alcohol dehydrogenase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P871_AROAE rbh
Putative alcohol dehydrogenase {ECO:0000313|EMBL:CAI06490.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_500_p_scaffold_3789_4
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3998..5164
DNA (1167bp) protein (389aa)
Branched-chain amino acid ABC transporter periplasmic protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GAS2_9BURK rbh
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:EOA06599.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_3789_5
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5276..6439
DNA (1164bp) protein (388aa)
ABC transporter substrate-binding protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F29C5 rbh
Branched-chain amino acid ABC transporter periplasmic protein {ECO:0000313|EMBL:EIJ46359.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_3789_6
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6459..7325
DNA (867bp) protein (289aa)
Putative branched-chain amino acid ABC transport system permease protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LDY3_RALME rbh
branched-chain amino acid ABC transport system permease; K01997 branched-chain amino acid transport system permease protein rbh
Putative branched-chain amino acid ABC transport system permease protein {ECO:0000313|EMBL:ABF11643.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_500_p_scaffold_3789_7
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7325..8347
DNA (1023bp) protein (341aa)
ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031715FE rbh
livM; branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EOA06606.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
SCNpilot_expt_500_p_scaffold_3789_8
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8344..8886
DNA (543bp) protein (181aa)
hemolysin III n=1 Tax=Pusillimonas noertemannii RepID=UPI00031ECA9F
Hemolysin III {ECO:0000313|EMBL:KDP88590.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
livG10; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_3789_9
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8956..9294
DNA (339bp) protein (113aa)
branched-chain amino acid ABC transporter n=1 Tax=Duganella zoogloeoides RepID=UPI00036DA98A
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL81852.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
Displaying 9 items

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