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SCNpilot_expt_500_p_scaffold_3244_4

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2828..3787

Top 3 Functional Annotations

Value Algorithm Source
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Pseudomonas sp. GM84 RepID=J2YVF1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 314.0
  • Bit_score: 468
  • Evalue 6.90e-129
  • rbh
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EJN40395.1}; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 314.0
  • Bit_score: 468
  • Evalue 9.60e-129
pyruvate carboxyltransferase similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 309.0
  • Bit_score: 387
  • Evalue 3.70e-105

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Taxonomy

Pseudomonas sp. GM84 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGCTGACCTGCCCGCTTCCGTCGCTTTGCACGAGGAGGGGCCCCGGGAGGGGTTCCAGATCGAGTCGAGCGACATCCCGACCGCCCGGAAGGTGGCCTTCATCGAAGCGCTTGCCGAGACCGGCGTGCGCCAGATCGATTGCGTCTCGTTCGTCAATCCGCAGCGCGTTCCCGGCATGGCCGACGCCGCCGAGGTGGCTGCGCAGGTGCGCAAGCGCCCGGGCGTGCGCTACACGGGACTGTGGCTCAACACCAAGGGCCTGATGCGCGCGCTGGAGACGCCGCTGGACATCGTCGGTGCGATCCGCCTCACCGCTTCCGAGACCTTCTGCGTCAGGAACACCGGGATGAACATCGCGCAGACCATCGACGAACAGCGCCGCTGGCTCGACGTCTACCGGGAGAAGCGCATTCCGGTGGAGTGGGGCTACGTGATGACCGCCTTCGGCTGCAACTTCGAGGGCTACATCGATCCCGCCAAGGTCGTCGCCATGGTCGGGCAGGTCCTCGATCTGGCAACGGAGTCGGAGGTGTCGCTGCGCGGCGTCTATCTCGCCGATACGGTGGGCTGGGGGACTCCTCTTTCCATCGAGCGGGGAATCGGTGCGGTCCGCGAGCGCTGGCCCGACCTCCCGATCGGGCTGCACCTGCACGACACGCGCGGCACCGGGCTGGCCAACGCCTACGCGGCTCTTCGGCTCGGCGTTCGGCAATTCGACACGACCTGCGCCGGGCTGGGAGGCTGCCCCTTCGCCGGGCACAAGGGAGCCGCAGGAAACATCTGCACCGAAGACATGGTGTTCATGTGCGAGGAGATGGGCATCGCCACCGGAATCGACCTCGAGAAGCTGATCGAATGCGCGCGGATGGCCGAGGAGATCGTCGGCCACCCGCTGCCGGGCAAGGTGGTGCGCGGCGGCAGCCTCGCGCCCTACAAGCGACAGGCGGCCGCTCGATGA
PROTEIN sequence
Length: 320
MADLPASVALHEEGPREGFQIESSDIPTARKVAFIEALAETGVRQIDCVSFVNPQRVPGMADAAEVAAQVRKRPGVRYTGLWLNTKGLMRALETPLDIVGAIRLTASETFCVRNTGMNIAQTIDEQRRWLDVYREKRIPVEWGYVMTAFGCNFEGYIDPAKVVAMVGQVLDLATESEVSLRGVYLADTVGWGTPLSIERGIGAVRERWPDLPIGLHLHDTRGTGLANAYAALRLGVRQFDTTCAGLGGCPFAGHKGAAGNICTEDMVFMCEEMGIATGIDLEKLIECARMAEEIVGHPLPGKVVRGGSLAPYKRQAAAR*