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SCNpilot_expt_500_p_scaffold_3244

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3244_1
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(93..689)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q397S4_BURS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB11287.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_expt_500_p_scaffold_3244_2
Pseudomonas sp. GM84, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(698..1846)
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) rbh
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. GM84 RepID=J3IYQ3_9PSED rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJN40403.1}; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
SCNpilot_expt_500_p_scaffold_3244_3
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1941..2735
DNA (795bp) protein (265aa)
enoyl-CoA hydratase n=1 Tax=Cycloclasticus pugetii RepID=UPI0003810BFB
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AFT67267.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
SCNpilot_expt_500_p_scaffold_3244_4
Pseudomonas sp. GM84, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2828..3787
DNA (960bp) protein (320aa)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Pseudomonas sp. GM84 RepID=J2YVF1_9PSED rbh
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EJN40395.1}; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
pyruvate carboxyltransferase
SCNpilot_expt_500_p_scaffold_3244_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3784..4890
DNA (1107bp) protein (369aa)
nerA; GTN reductase; K10680 N-ethylmaleimide reductase [EC:1.-.-.-]
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035F51A4
NADH:flavin oxidoreductase {ECO:0000313|EMBL:GAN78454.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_expt_500_p_scaffold_3244_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4945..6126
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI39_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42292.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_500_p_scaffold_3244_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6157..7026
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUP6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86614.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
branched chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_p_scaffold_3244_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7033..7986
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRI4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86615.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_500_p_scaffold_3244_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7991..8755
DNA (765bp) protein (255aa)
Monosaccharide-transporting ATPase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E8I9_9GAMM
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
SCNpilot_expt_500_p_scaffold_3244_10
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8745..9461
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKX9_9FIRM
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:AJY74146.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3244_11
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9479..9781
DNA (303bp) protein (101aa)
propionyl-CoA carboxylase beta chain (EC:6.4.1.3)
Propionyl-CoA carboxylase beta chain n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2X2V3_9NOCA
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:EME55336.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
Displaying 11 items

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