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SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

SCNPILOT_EXPT_500_P_Burkholderiales_70_8
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 8.09 Longest contig: 18.20 Kbp Bin length: 3.44 Mbp GC content: 69.82 %
Contigs count: 1169 Features count: 4201 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Displaying items 1001-1050 of 1169 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_37763
Species: Candidatus Accumulibacter sp. BA-93 (50%)
2 1439 bp 73.38 7.47 88.39
SCNpilot_expt_500_p_scaffold_34892
Species: Lautropia mirabilis (100%)
2 1547 bp 70.59 7.43 98.71
SCNpilot_expt_500_p_scaffold_41403
Species: Azospira oryzae (50%)
2 1323 bp 70.75 4.54 85.03
SCNpilot_expt_500_p_scaffold_75942
Species: Advenella mimigardefordensis (50%)
2 1192 bp 70.55 9.23 87.58
SCNpilot_expt_500_p_scaffold_45533
Species: Thiomonas sp. CB2 (50%)
2 1218 bp 68.64 8.62 90.15
SCNpilot_expt_500_p_scaffold_9807
Species: Thauera terpenica (50%)
2 4516 bp 75.75 9.08 100.04
SCNpilot_expt_500_p_scaffold_11888
Species: Ralstonia solanacearum (100%)
2 3906 bp 69.87 8.64 100.08
SCNpilot_expt_500_p_scaffold_32025
Species: Acidovorax avenae (50%)
2 1676 bp 71.78 10.74 98.63
SCNpilot_expt_500_p_scaffold_21457
Species: Pandoraea apista (50%)
2 3243 bp 68.30 9.56 79.09
SCNpilot_expt_500_p_scaffold_57417
Species: Cupriavidus sp. SK-3 (50%)
2 1000 bp 71.70 5.75 100.20
SCNpilot_expt_500_p_scaffold_39251
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1388 bp 74.71 7.02 98.13
SCNpilot_expt_500_p_scaffold_32283
Species: Bordetella hinzii (50%)
2 1664 bp 71.88 6.61 96.45
SCNpilot_expt_500_p_scaffold_28851
Species: BJP_08E140C01_Burkholderiales_65_30 (50%)
2 1843 bp 65.93 8.41 95.55
SCNpilot_expt_500_p_scaffold_53306
Species: RLO_Betaproteobacteria_68_20 (50%)
2 1065 bp 68.73 5.16 79.15
SCNpilot_expt_500_p_scaffold_20884
Species: Nitrosomonas eutropha (50%)
2 2468 bp 64.67 7.50 92.75
SCNpilot_expt_500_p_scaffold_48788
Species: RBG_16_Betaproteobacteria_64_18_curated (50%)
2 1148 bp 63.33 11.76 77.87
SCNpilot_expt_500_p_scaffold_23365
Species: R_Betaproteobacteria_67_19 (50%)
2 2233 bp 70.04 7.50 96.33
SCNpilot_expt_500_p_scaffold_26982
Species: Janthinobacterium agaricidamnosum (50%)
2 1959 bp 70.09 4.59 92.34
SCNpilot_expt_500_p_scaffold_44629
Species: GWA2_Curvibacter_64_110_curated (50%)
2 1240 bp 69.84 7.26 95.32
SCNpilot_expt_500_p_scaffold_52517
Species: R_Betaproteobacteria_68_150 (100%)
2 1078 bp 67.53 8.12 97.96
SCNpilot_expt_500_p_scaffold_25927
Species: Burkholderia glumae (50%)
2 2033 bp 71.62 7.87 90.61
SCNpilot_expt_500_p_scaffold_21975
Species: R_Burkholderiales_61_11 (50%)
2 2358 bp 71.63 6.79 98.22
SCNpilot_expt_500_p_scaffold_41158
Species: R_Betaproteobacteria_63_19 (50%)
2 1331 bp 68.82 6.20 72.13
SCNpilot_expt_500_p_scaffold_27352
Species: Pandoraea apista (50%)
2 1934 bp 71.46 9.18 92.45
SCNpilot_expt_500_p_scaffold_23881
Species: R_Burkholderiales_61_11 (100%)
2 2189 bp 70.40 5.94 99.36
SCNpilot_expt_500_p_scaffold_28345
Species: R_Betaproteobacteria_64_14 (50%)
2 1872 bp 70.67 7.08 101.44
SCNpilot_expt_500_p_scaffold_28601
Species: Cupriavidus sp. SK-3 (100%)
2 1858 bp 70.88 9.69 99.78
SCNpilot_expt_500_p_scaffold_54497
Species: Bordetella bronchiseptica (50%)
2 1045 bp 67.27 7.66 87.56
SCNpilot_expt_500_p_scaffold_34395
Species: R_Rhodocyclales_63_24 (50%)
2 1569 bp 71.13 9.40 100.19
SCNpilot_expt_500_p_scaffold_17948
Species: Massilia sp. LC238 (50%)
2 2810 bp 74.02 7.92 97.69
SCNpilot_expt_500_p_scaffold_40955
Species: Herbaspirillum seropedicae (50%)
2 1336 bp 68.19 7.86 98.58
SCNpilot_expt_500_p_scaffold_27613
Species: Thiomonas arsenitoxydans (50%)
2 1919 bp 71.13 8.47 97.55
SCNpilot_expt_500_p_scaffold_32041
Species: Herbaspirillum sp. CF444 (50%)
2 1675 bp 67.88 8.21 98.69
SCNpilot_expt_500_p_scaffold_28097
Species: Cupriavidus necator (50%)
2 1888 bp 71.50 7.15 99.31
SCNpilot_expt_500_p_scaffold_49456
Species: Delftia acidovorans (50%)
2 1135 bp 72.69 7.49 91.98
SCNpilot_expt_500_p_scaffold_34146
Species: Sulfuricella sp. T08 (50%)
2 1579 bp 70.99 9.18 101.46
SCNpilot_expt_500_p_scaffold_13659
Species: Ralstonia solanacearum (50%)
2 3506 bp 70.74 7.70 99.17
SCNpilot_expt_500_p_scaffold_48034
Species: Pandoraea pulmonicola (50%)
2 1163 bp 72.06 11.61 97.51
SCNpilot_expt_500_p_scaffold_47314
Species: R_Gallionellales_59_110 (50%)
2 1179 bp 71.59 9.33 72.77
SCNpilot_expt_500_p_scaffold_46779
Species: Achromobacter xylosoxidans (50%)
2 1190 bp 68.82 7.98 90.76
SCNpilot_expt_500_p_scaffold_45300
Species: Burkholderiaceae bacterium 26 (50%)
2 3171 bp 74.77 6.70 59.32
SCNpilot_expt_500_p_scaffold_44389
Species: Comamonadaceae bacterium B1 (50%)
2 1245 bp 68.43 6.63 76.39
SCNpilot_expt_500_p_scaffold_22359
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated (50%)
2 2325 bp 73.59 7.20 90.45
SCNpilot_expt_500_p_scaffold_43505
Species: RBG_16_Betaproteobacteria_58_11_curated (50%)
2 1267 bp 68.59 6.12 95.19
SCNpilot_expt_500_p_scaffold_43507
Species: Pandoraea pnomenusa (50%)
2 1267 bp 73.95 9.47 96.61
SCNpilot_expt_500_p_scaffold_27629
Species: Methyloversatilis universalis (50%)
2 1918 bp 60.17 9.52 84.31
SCNpilot_expt_500_p_scaffold_33341
Species: Ralstonia pickettii (50%)
2 1616 bp 73.02 8.04 99.50
SCNpilot_expt_500_p_scaffold_33598
Species: Achromobacter insuavis (50%)
2 1604 bp 70.89 7.79 94.64
SCNpilot_expt_500_p_scaffold_20911
Species: Burkholderia terrae (50%)
2 2465 bp 72.70 9.43 99.55
SCNpilot_expt_500_p_scaffold_48302
Species: Polaromonas sp. JS666 (50%)
2 1158 bp 70.21 5.61 92.23
Displaying items 1001-1050 of 1169 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.