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SCNpilot_expt_500_p_scaffold_11329

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_11329_1
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(108..335)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000288FFB0
Putative uncharacterized domain protein {ECO:0000313|EMBL:CDG84141.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCNpilot_expt_500_p_scaffold_11329_2
unknown

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comp(332..517)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11329_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(517..981)
DNA (465bp) protein (155aa)
Bacteriophage protein (Gp55-like) n=1 Tax=Acinetobacter sp. HA RepID=I4ZTH6_9GAMM
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCNpilot_expt_500_p_scaffold_11329_4
Yersinia similis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1105..1323)
DNA (219bp) protein (73aa)
Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N6_9ENTR
DNA-binding protein {ECO:0000313|EMBL:AHK20724.1}; TaxID=367190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia similis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_11329_5
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1359..1769
DNA (411bp) protein (137aa)
XRE family transcriptional regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2G0P1_9GAMM
Putative transcription factor, MBF1 like protein {ECO:0000313|EMBL:EUJ11285.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
SCNpilot_expt_500_p_scaffold_11329_6
unknown

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1810..2184
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11329_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2181..2408)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMX2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49586.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_expt_500_p_scaffold_11329_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2422..2700)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU64119.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_expt_500_p_scaffold_11329_9
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2694..3296)
DNA (603bp) protein (201aa)
Putative tail fiber assembly-like protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2Z0_9NEIS
Putative tail fiber assembly-like protein {ECO:0000313|EMBL:EEG08943.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_11329_10
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3293..3595)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DS46_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL08585.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
SCNpilot_expt_500_p_scaffold_11329_11
unknown

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comp(3604..4065)
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying 11 items

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