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SCNPILOT_CONT_300_BF_Burkholderiales_67_33

SCNPILOT_EXPT_500_P_Burkholderiales_67_5
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 5.00 Longest contig: 15.91 Kbp Bin length: 2.37 Mbp GC content: 66.77 %
Contigs count: 1490 Features count: 3506 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Displaying items 1001-1050 of 1490 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_47931
Species: RLO_Betaproteobacteria_65_14 (50%)
2 1166 bp 68.10 3.22 91.34
SCNpilot_expt_500_p_scaffold_32315
Genus: Achromobacter (66.67%)
3 1662 bp 65.52 2.71 91.34
SCNpilot_expt_500_p_scaffold_35822
Species: Polaromonas naphthalenivorans (50%)
2 1511 bp 68.56 3.14 91.33
SCNpilot_expt_500_p_scaffold_29026
Species: Burkholderiaceae bacterium 16 (50%)
2 1833 bp 63.99 3.82 91.33
SCNpilot_expt_500_p_scaffold_20284
Genus: Achromobacter (50%)
4 2533 bp 67.07 5.72 91.31
SCNpilot_expt_500_p_scaffold_21456
Order: Burkholderiales (66.67%)
3 2409 bp 67.37 4.67 91.28
SCNpilot_expt_500_p_scaffold_22967
Order: Burkholderiales (66.67%)
3 2268 bp 68.47 2.65 91.27
SCNpilot_expt_500_p_scaffold_40882
Species: Pigmentiphaga sp. NDS-2 (100%)
2 1338 bp 63.23 3.92 91.26
SCNpilot_expt_500_p_scaffold_41688
Species: Bordetella pertussis (50%)
2 1315 bp 63.95 5.32 91.25
SCNpilot_expt_500_p_scaffold_44878
Species: Cupriavidus sp. SK-3 (50%)
2 1233 bp 67.88 3.65 91.24
SCNpilot_expt_500_p_scaffold_24895
Species: Erwinia billingiae (50%)
2 2108 bp 69.97 3.08 91.22
SCNpilot_expt_500_p_scaffold_39588
Species: Burkholderia pseudomallei (100%)
2 1378 bp 61.68 3.63 91.22
SCNpilot_expt_500_p_scaffold_56528
Species: Burkholderia sp. YI23 (50%)
2 1013 bp 67.82 3.46 91.21
SCNpilot_expt_500_p_scaffold_18418
Domain: Bacteria (66.67%)
3 2752 bp 65.52 3.63 91.13
SCNpilot_expt_500_p_scaffold_35219
Species: Sphingopyxis sp. LC81 (50%)
2 1535 bp 68.08 4.40 91.07
SCNpilot_expt_500_p_scaffold_37937
Order: Burkholderiales (66.67%)
3 1433 bp 63.71 3.49 91.07
SCNpilot_expt_500_p_scaffold_48546
Species: Burkholderia xenovorans (66.67%)
3 1153 bp 67.39 6.94 91.07
SCNpilot_expt_500_p_scaffold_41808
Species: Bordetella bronchiseptica (50%)
2 1312 bp 69.28 6.48 91.01
SCNpilot_expt_500_p_scaffold_41073
Species: Sulfuricella sp. T08 (50%)
2 1332 bp 69.82 7.13 90.99
SCNpilot_expt_500_p_scaffold_27123
Species: Acidithiobacillus ferrivorans (50%)
2 1950 bp 68.41 2.31 90.92
SCNpilot_expt_500_p_scaffold_25881
Species: Variovorax sp. CF313 (50%)
2 2036 bp 68.66 3.93 90.91
SCNpilot_expt_500_p_scaffold_55401
Species: Variovorax paradoxus (100%)
1 1030 bp 65.53 1.21 90.87
SCNpilot_expt_500_p_scaffold_30251
Species: Brevundimonas nasdae (50%)
2 1767 bp 67.80 5.52 90.83
SCNpilot_expt_500_p_scaffold_48409
Species: Variovorax paradoxus (50%)
2 1156 bp 70.16 4.97 90.83
SCNpilot_expt_500_p_scaffold_14107
Class: Alphaproteobacteria (50%)
4 3412 bp 59.73 5.72 90.83
SCNpilot_expt_500_p_scaffold_28059
Species: Collimonas arenae (50%)
2 1890 bp 68.31 6.35 90.79
SCNpilot_expt_500_p_scaffold_33442
Species: Variovorax paradoxus (100%)
3 1610 bp 70.25 4.66 90.75
SCNpilot_expt_500_p_scaffold_17702
Order: Burkholderiales (66.67%)
3 2844 bp 67.44 3.96 90.72
SCNpilot_expt_500_p_scaffold_36752
Class: Betaproteobacteria (66.67%)
3 1475 bp 67.93 4.07 90.71
SCNpilot_expt_500_p_scaffold_28928
Species: Cupriavidus basilensis (50%)
2 1839 bp 71.07 3.81 90.70
SCNpilot_expt_500_p_scaffold_21998
Order: Burkholderiales (75%)
4 2356 bp 68.72 4.67 90.66
SCNpilot_expt_500_p_scaffold_42109
Species: Alicycliphilus sp. B1 (50%)
2 1304 bp 71.86 3.83 90.64
SCNpilot_expt_500_p_scaffold_39298
Species: GWA2_Curvibacter_64_110_curated (50%)
2 1387 bp 71.09 3.60 90.63
SCNpilot_expt_500_p_scaffold_45782
Species: Acetobacteraceae bacterium AT-5844 (100%)
1 1212 bp 63.86 4.54 90.59
SCNpilot_expt_500_p_scaffold_43223
Species: Achromobacter xylosoxidans (100%)
2 1275 bp 65.33 3.53 90.59
SCNpilot_expt_500_p_scaffold_49931
Species: Hylemonella gracilis (50%)
2 1126 bp 67.14 5.77 90.59
SCNpilot_expt_500_p_scaffold_39763
Species: Advenella mimigardefordensis (50%)
2 1762 bp 60.39 4.68 90.58
SCNpilot_expt_500_p_scaffold_30982
Species: Variovorax paradoxus (50%)
4 1729 bp 67.90 4.92 90.57
SCNpilot_expt_500_p_scaffold_26997
Order: Burkholderiales (66.67%)
3 1958 bp 69.61 4.60 90.55
SCNpilot_expt_500_p_scaffold_33524 5 1607 bp 58.87 3.11 90.54
SCNpilot_expt_500_p_scaffold_36147
Species: Dyella jiangningensis (50%)
2 1498 bp 66.02 4.67 90.52
SCNpilot_expt_500_p_scaffold_45758
Species: Achromobacter xylosoxidans (50%)
2 1213 bp 58.37 6.18 90.52
SCNpilot_expt_500_p_scaffold_15676
Phylum: Proteobacteria (60%)
5 3139 bp 68.33 5.73 90.51
SCNpilot_expt_500_p_scaffold_41657
Species: Achromobacter xylosoxidans (50%)
2 1316 bp 68.84 4.18 90.50
SCNpilot_expt_500_p_scaffold_22917
Class: Gammaproteobacteria (60%)
5 2274 bp 64.38 5.17 90.50
SCNpilot_expt_500_p_scaffold_28275
Order: Burkholderiales (66.67%)
3 1877 bp 61.32 5.33 90.46
SCNpilot_expt_500_p_scaffold_55704
Species: Bordetella petrii (50%)
2 1025 bp 65.66 3.41 90.44
SCNpilot_expt_500_p_scaffold_16582
Phylum: Proteobacteria (66.67%)
3 2999 bp 68.39 4.50 90.43
SCNpilot_expt_500_p_scaffold_35091
Species: RBG_16_Betaproteobacteria_64_18_curated (50%)
2 1540 bp 60.06 3.90 90.39
SCNpilot_expt_500_p_scaffold_40479
Class: Betaproteobacteria (66.67%)
3 1351 bp 67.65 4.81 90.38
Displaying items 1001-1050 of 1490 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.