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SCNPILOT_CONT_300_BF_Burkholderiales_67_33

SCNPILOT_EXPT_500_P_Burkholderiales_67_5
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 5.00 Longest contig: 15.91 Kbp Bin length: 2.37 Mbp GC content: 66.77 %
Contigs count: 1490 Features count: 3506 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Displaying items 1051-1100 of 1490 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_14592
Order: Burkholderiales (60%)
5 3997 bp 67.30 7.63 90.37
SCNpilot_expt_500_p_scaffold_23523
Phylum: Proteobacteria (75%)
4 2220 bp 67.34 4.95 90.27
SCNpilot_expt_500_p_scaffold_44050
Species: Streptomyces leeuwenhoekii (50%)
2 1253 bp 65.68 4.39 90.26
SCNpilot_expt_500_p_scaffold_17164
Order: Burkholderiales (80%)
5 2915 bp 67.92 6.00 90.26
SCNpilot_expt_500_p_scaffold_23102
Class: Betaproteobacteria (66.67%)
3 2257 bp 67.52 4.65 90.25
SCNpilot_expt_500_p_scaffold_46368
Species: Cupriavidus basilensis (100%)
1 1200 bp 72.83 2.92 90.25
SCNpilot_expt_500_p_scaffold_37338
Species: Hydrogenophaga sp. PBC (50%)
2 1456 bp 64.35 6.87 90.25
SCNpilot_expt_500_p_scaffold_45859
Species: Rhizobium tropici (66.67%)
3 1211 bp 67.55 4.75 90.17
SCNpilot_expt_500_p_scaffold_26486
Species: Advenella kashmirensis (66.67%)
3 1993 bp 64.83 5.39 90.17
SCNpilot_expt_500_p_scaffold_11725
Genus: Achromobacter (60%)
5 3953 bp 67.87 5.19 90.16
SCNpilot_expt_500_p_scaffold_34555
Genus: Alicycliphilus (66.67%)
3 1561 bp 60.09 3.52 90.13
SCNpilot_expt_500_p_scaffold_49972
Species: Burkholderia grimmiae (50%)
2 1125 bp 68.98 3.56 90.13
SCNpilot_expt_500_p_scaffold_48943
Species: Achromobacter xylosoxidans (50%)
2 1145 bp 69.00 5.24 90.13
SCNpilot_expt_500_p_scaffold_17160
Class: Gammaproteobacteria (50%)
4 2916 bp 69.07 3.60 90.12
SCNpilot_expt_500_p_scaffold_57267
Species: Herbaspirillum sp. CF444 (50%)
2 1002 bp 67.76 6.24 90.12
SCNpilot_expt_500_p_scaffold_23239
Order: Burkholderiales (60%)
5 2244 bp 52.32 4.23 90.11
SCNpilot_expt_500_p_scaffold_27768
Order: Burkholderiales (100%)
3 1908 bp 69.29 6.81 90.09
SCNpilot_expt_500_p_scaffold_19306
Order: Burkholderiales (66.67%)
3 2643 bp 68.22 4.45 90.01
SCNpilot_expt_500_p_scaffold_56057
Species: Acetobacteraceae bacterium AT-5844 (100%)
1 1020 bp 64.90 5.39 90.00
SCNpilot_expt_500_p_scaffold_37741
Species: Achromobacter insuavis (50%)
2 1440 bp 68.75 6.25 90.00
SCNpilot_expt_500_p_scaffold_37825
Species: RLO_Betaproteobacteria_68_20 (50%)
2 1437 bp 68.89 6.26 89.98
SCNpilot_expt_500_p_scaffold_13812
Order: Burkholderiales (100%)
3 3475 bp 55.65 4.46 89.96
SCNpilot_expt_500_p_scaffold_47058
Species: R_Betaproteobacteria_65_24 (50%)
2 1184 bp 71.54 4.22 89.95
SCNpilot_expt_500_p_scaffold_45415
Species: Herbaspirillum sp. CF444 (50%)
2 1221 bp 65.60 2.46 89.93
SCNpilot_expt_500_p_scaffold_39870
Order: Burkholderiales (66.67%)
3 1368 bp 67.18 3.11 89.91
SCNpilot_expt_500_p_scaffold_39350
Species: Serratia odorifera (50%)
2 1385 bp 66.57 4.33 89.89
SCNpilot_expt_500_p_scaffold_40688
Order: Burkholderiales (66.67%)
3 1345 bp 69.14 5.02 89.89
SCNpilot_expt_500_p_scaffold_54516
Species: Janthinobacterium sp. Marseille (100%)
1 1045 bp 66.41 2.15 89.86
SCNpilot_expt_500_p_scaffold_43429
Genus: Burkholderia (66.67%)
3 1269 bp 70.84 4.33 89.83
SCNpilot_expt_500_p_scaffold_44747
Class: Betaproteobacteria (66.67%)
3 1236 bp 67.31 4.85 89.81
SCNpilot_expt_500_p_scaffold_53629
Species: Mesorhizobium loti (50%)
2 1059 bp 69.22 2.60 89.80
SCNpilot_expt_500_p_scaffold_38329
Order: Burkholderiales (66.67%)
3 1420 bp 67.32 4.23 89.79
SCNpilot_expt_500_p_scaffold_42646
Species: Achromobacter sp. RTa (50%)
2 1290 bp 67.75 4.65 89.77
SCNpilot_expt_500_p_scaffold_53412
Species: Azotobacter chroococcum (100%)
1 1063 bp 71.31 3.76 89.75
SCNpilot_expt_500_p_scaffold_19604
Phylum: Proteobacteria (66.67%)
3 2608 bp 63.23 7.09 89.72
SCNpilot_expt_500_p_scaffold_47888
Species: Cupriavidus necator (50%)
2 1167 bp 65.47 6.86 89.72
SCNpilot_expt_500_p_scaffold_53952
Species: Delftia acidovorans (100%)
2 1054 bp 60.63 2.37 89.66
SCNpilot_expt_500_p_scaffold_21179
Order: Burkholderiales (66.67%)
3 2436 bp 65.72 4.72 89.66
SCNpilot_expt_500_p_scaffold_32853
Species: Oligotropha carboxidovorans (66.67%)
3 1637 bp 63.90 5.50 89.62
SCNpilot_expt_500_p_scaffold_53272
Species: Bordetella bronchiseptica (50%)
2 1065 bp 66.01 4.69 89.58
SCNpilot_expt_500_p_scaffold_27377
Species: Ralstonia pickettii (66.67%)
3 1933 bp 65.60 5.43 89.55
SCNpilot_expt_500_p_scaffold_18262
Order: Burkholderiales (80%)
5 2774 bp 66.33 3.06 89.55
SCNpilot_expt_500_p_scaffold_22592
Phylum: Proteobacteria (100%)
4 2302 bp 64.73 4.56 89.53
SCNpilot_expt_500_p_scaffold_27051
Order: Burkholderiales (66.67%)
3 1954 bp 66.94 5.76 89.51
SCNpilot_expt_500_p_scaffold_43905
Species: Pseudomonas cichorii (50%)
2 1257 bp 68.89 5.17 89.50
SCNpilot_expt_500_p_scaffold_57152
Phylum: Proteobacteria (66.67%)
3 1003 bp 66.80 1.99 89.43
SCNpilot_expt_500_p_scaffold_25972
Species: Marinobacter lipolyticus (50%)
2 2030 bp 68.77 4.68 89.41
SCNpilot_expt_500_p_scaffold_39633
Species: Bordetella petrii (50%)
2 1376 bp 65.12 6.90 89.39
SCNpilot_expt_500_p_scaffold_72379
Species: Achromobacter sp. RTa (100%)
2 1327 bp 62.40 2.64 89.30
SCNpilot_expt_500_p_scaffold_34150
Species: Bordetella bronchiseptica (50%)
2 1579 bp 71.69 1.58 89.30
Displaying items 1051-1100 of 1490 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.