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SCNPILOT_CONT_300_BF_Burkholderiales_67_33

SCNPILOT_EXPT_500_P_Burkholderiales_67_5
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 5.00 Longest contig: 15.91 Kbp Bin length: 2.37 Mbp GC content: 66.77 %
Contigs count: 1490 Features count: 3506 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Displaying items 1401-1450 of 1490 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_43288
Species: RIFOXYC2_FULL_Burkholderiales_59_8_curated (50%)
2 1273 bp 68.81 5.11 100.16
SCNpilot_expt_500_p_scaffold_44216
Species: Bordetella sp. 8-296-03 (50%)
2 1249 bp 71.58 6.81 100.16
SCNpilot_expt_500_p_scaffold_46295
Species: R_Acidobacteria_65_29 (50%)
2 1201 bp 67.44 5.00 100.17
SCNpilot_expt_500_p_scaffold_46418
Species: Advenella kashmirensis (50%)
2 1198 bp 71.62 5.43 100.17
SCNpilot_expt_500_p_scaffold_47385
Species: Klebsiella oxytoca (100%)
2 1177 bp 64.23 4.67 100.17
SCNpilot_expt_500_p_scaffold_48544
Species: Methylobacterium sp. 4-46 (50%)
2 1153 bp 70.51 3.47 100.17
SCNpilot_expt_500_p_scaffold_49472
Species: Achromobacter arsenitoxydans (50%)
2 1135 bp 69.16 3.08 100.18
SCNpilot_expt_500_p_scaffold_49787
Species: Cupriavidus basilensis (50%)
2 1129 bp 68.64 3.10 100.18
SCNpilot_expt_500_p_scaffold_50386
Species: Afipia sp. 1NLS2 (50%)
2 1117 bp 71.44 5.37 100.18
SCNpilot_expt_500_p_scaffold_50722
Species: Bradyrhizobium diazoefficiens (50%)
2 1111 bp 71.11 5.85 100.18
SCNpilot_expt_500_p_scaffold_51834
Species: Achromobacter sp. RTa (50%)
2 1090 bp 66.70 4.13 100.18
SCNpilot_expt_500_p_scaffold_52491
Species: Achromobacter insuavis (50%)
2 1078 bp 69.76 2.32 100.19
SCNpilot_expt_500_p_scaffold_101783
Species: Pandoraea pulmonicola (50%)
2 1072 bp 70.52 3.26 100.19
SCNpilot_expt_500_p_scaffold_54321
Species: Bradyrhizobium sp. WSM471 (50%)
2 1048 bp 67.18 5.25 100.19
SCNpilot_expt_500_p_scaffold_34652
Order: Burkholderiales (100%)
3 1557 bp 70.01 5.30 100.19
SCNpilot_expt_500_p_scaffold_57183
Species: Cupriavidus necator (50%)
2 1003 bp 68.69 4.49 100.20
SCNpilot_expt_500_p_scaffold_36668
Species: Burkholderia cepacia (50%)
2 1479 bp 67.95 2.37 100.20
SCNpilot_expt_500_p_scaffold_41860
Species: RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated (50%)
2 1311 bp 70.25 1.91 100.23
SCNpilot_expt_500_p_scaffold_42626
Species: Pseudomonas chlororaphis (50%)
2 1290 bp 70.16 3.49 100.23
SCNpilot_expt_500_p_scaffold_43321
Species: Bordetella bronchiseptica (100%)
2 1272 bp 70.60 3.14 100.24
SCNpilot_expt_500_p_scaffold_31896
Species: Bordetella petrii (50%)
2 1682 bp 68.43 3.86 100.24
SCNpilot_expt_500_p_scaffold_32020
Species: R_Betaproteobacteria_64_14 (50%)
2 1676 bp 72.43 3.13 100.24
SCNpilot_expt_500_p_scaffold_32085
Species: Hymenobacter swuensis (50%)
2 1673 bp 72.15 3.59 100.24
SCNpilot_expt_500_p_scaffold_32660
Species: Bordetella sp. 8-296-03 (50%)
2 1646 bp 71.75 5.32 100.24
SCNpilot_expt_500_p_scaffold_25794
Class: Betaproteobacteria (50%)
4 2044 bp 68.05 5.14 100.25
SCNpilot_expt_500_p_scaffold_45519
Species: Herbaspirillum sp. TSA66 (50%)
2 1218 bp 68.56 5.34 100.25
SCNpilot_expt_500_p_scaffold_46732
Species: RLO_Pseudomonas_59_9 (50%)
2 1191 bp 69.86 4.62 100.25
SCNpilot_expt_500_p_scaffold_48603
Species: Mesorhizobium sp. L103C131B0 (50%)
2 1152 bp 69.53 3.26 100.26
SCNpilot_expt_500_p_scaffold_48904
Phylum: Proteobacteria (66.67%)
3 1146 bp 61.87 3.93 100.26
SCNpilot_expt_500_p_scaffold_49669
Species: Hylemonella gracilis (50%)
2 1131 bp 71.18 1.99 100.27
SCNpilot_expt_500_p_scaffold_36142
Domain: Bacteria (66.67%)
3 1499 bp 60.97 3.34 100.27
SCNpilot_expt_500_p_scaffold_28702
Species: Ralstonia pickettii (66.67%)
3 1852 bp 70.41 5.40 100.27
SCNpilot_expt_500_p_scaffold_24439
Order: Burkholderiales (66.67%)
3 2145 bp 70.91 5.13 100.28
SCNpilot_expt_500_p_scaffold_55660
Species: Ralstonia sp. PBA (50%)
2 1026 bp 67.93 6.82 100.29
SCNpilot_expt_500_p_scaffold_32443
Species: Herbaspirillum sp. YR522 (100%)
2 1657 bp 67.41 5.43 100.30
SCNpilot_expt_500_p_scaffold_41360
Class: Betaproteobacteria (66.67%)
3 1325 bp 71.62 2.64 100.30
SCNpilot_expt_500_p_scaffold_27120
Class: Betaproteobacteria (66.67%)
3 1950 bp 68.26 4.36 100.31
SCNpilot_expt_500_p_scaffold_43021
Species: Mumia flava (50%)
2 1280 bp 67.97 5.08 100.31
SCNpilot_expt_500_p_scaffold_43147
Species: Achromobacter xylosoxidans (50%)
2 1277 bp 61.55 4.89 100.31
SCNpilot_expt_500_p_scaffold_28055
Genus: Bordetella (66.67%)
3 1890 bp 67.88 5.82 100.32
SCNpilot_expt_500_p_scaffold_44163
Species: Hylemonella gracilis (50%)
2 1250 bp 68.72 6.80 100.32
SCNpilot_expt_500_p_scaffold_28521
Species: Comamonas testosteroni (100%)
3 1863 bp 67.42 5.10 100.32
SCNpilot_expt_500_p_scaffold_44927
Species: Castellaniella defragrans (50%)
2 1232 bp 69.72 4.87 100.33
SCNpilot_expt_500_p_scaffold_46095
Species: Achromobacter arsenitoxydans (50%)
2 1205 bp 70.71 3.73 100.33
SCNpilot_expt_500_p_scaffold_46098
Species: Achromobacter xylosoxidans (100%)
2 1205 bp 70.54 2.07 100.33
SCNpilot_expt_500_p_scaffold_48207
Species: Brevundimonas nasdae (100%)
2 1160 bp 64.14 6.03 100.35
SCNpilot_expt_500_p_scaffold_27555
Species: Burkholderia cepacia (50%)
4 1922 bp 67.01 4.16 100.36
SCNpilot_expt_500_p_scaffold_22517
Species: Pseudomonas fluorescens (50%)
4 2310 bp 69.61 5.30 100.39
SCNpilot_expt_500_p_scaffold_27846
Class: Betaproteobacteria (66.67%)
3 1903 bp 69.52 6.57 100.42
SCNpilot_expt_500_p_scaffold_33076
Species: Burkholderia graminis (50%)
2 1628 bp 68.37 3.69 100.43
Displaying items 1401-1450 of 1490 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.