ggKbase home page

SCNpilot_expt_500_p_scaffold_28816_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(692..1444)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E69640 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 248.0
  • Bit_score: 383
  • Evalue 2.30e-103
  • rbh
Marine sediment metagenome DNA, contig: S03H2_S25528 {ECO:0000313|EMBL:GAH79728.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 215.0
  • Bit_score: 349
  • Evalue 3.90e-93
hutC; histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 230.0
  • Bit_score: 240
  • Evalue 5.80e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 753
ATGCCTGATATTCGGAGATTGCGGCGGACGAGTCCGCGAACCAACGGCGTGGCGCGCTATACCGAAATCCAACGTGCACTTGAGACCGCGATTTTTTCGGGAGACTGGCCGCCGGGCACCCGCGTGCCTTCAGAGCAGGAATTGCTGAAGCGCTATCGCTGCTCACGCATGACGGTCAACAAGGCATTGAGTGCGCTCGCTGCTTCGGGGCTGGTCGTTCGTCGCCGCCGTTCCGGCAGCTTTGTCGCGCAGCGTCAAGGCGAGAAGAACGTTCTGCAGATTCACGACATCGAAGAGGAAATTCAGCGTGAGGGGAAATCCTACCGCGTCAAGCTGGTATCGCGCAGCGAACGCAAGGCGACCAAGCGAGATGCCGCGCGCCTAGATGTGCCGGTGTCCACGCGCATACTGGCGCTGACTTGCGTGCATTATGGCGAAGAACGCCCGCTGGTCGCGGAGGATCGATTAATCAACCTCGATGCGGTGCCATCGGCGACGGAAGTGGACTTCAACGAAACGTCACCGGGAAACTGGTTGTTGAAGCAGGTGCCGTGGAGCGAGGCCGAACATCATATCCGGGCAGTCAATGCCAGTGAGGATATCGCGGAACATCTCGAGATCACCGAAGGCGAAGCCTGTCTCGTTGTGGAGAGAAGGACGCGGCATGGTGGGCGCTCCATTACTCACGTCGTGCTGTCATATCCCGGCGACGGGTATCAACTCGTCGCGCGCTTCAGTCCGTCGCAGGGGTGA
PROTEIN sequence
Length: 251
MPDIRRLRRTSPRTNGVARYTEIQRALETAIFSGDWPPGTRVPSEQELLKRYRCSRMTVNKALSALAASGLVVRRRRSGSFVAQRQGEKNVLQIHDIEEEIQREGKSYRVKLVSRSERKATKRDAARLDVPVSTRILALTCVHYGEERPLVAEDRLINLDAVPSATEVDFNETSPGNWLLKQVPWSEAEHHIRAVNASEDIAEHLEITEGEACLVVERRTRHGGRSITHVVLSYPGDGYQLVARFSPSQG*