ggKbase home page

SCNpilot_expt_500_p_scaffold_28816

Search features with annotation key words

Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_28816_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..559)
DNA (558bp) protein (186aa)
ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034678BE
ABC transporter {ECO:0000313|EMBL:KIZ47881.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_expt_500_p_scaffold_28816_2

Not on your lists

comp(692..1444)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E69640 rbh
Marine sediment metagenome DNA, contig: S03H2_S25528 {ECO:0000313|EMBL:GAH79728.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hutC; histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor
SCNpilot_expt_500_p_scaffold_28816_3

Not on your lists

comp(1437..1844)
DNA (408bp) protein (136aa)
formiminoglutamate deiminase; K05603 formimidoylglutamate deiminase [EC:3.5.3.13]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003161F55
Marine sediment metagenome DNA, contig: S03H2_S13132 {ECO:0000313|EMBL:GAH68432.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 3 items

View Taxonomy