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SCNPILOT_EXPT_1000_BF_Niastella_43_130

SCNPILOT_EXPT_500_P_Sphingobacteriales_43_2
In projects: SCNPILOT_EXPT_500_P

Consensus taxonomy: Sphingobacteriales  →  Sphingobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_p_UNK

Properties

Avg. coverage: 2.15 Longest contig: 6.61 Kbp Bin length: 404.28 Kbp GC content: 43.32 %
Contigs count: 318 Features count: 578 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 7 / 55 BSCG 6 / 51 ASCG 1 / 38
Displaying items 101-150 of 318 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_p_scaffold_48923
Species: Flavihumibacter petaseus (50%)
2 1145 bp 43.41 1.00 80.96
SCNpilot_expt_500_p_scaffold_52656
Species: Alistipes sp. CAG:831 (50%)
2 1075 bp 31.91 1.40 93.77
SCNpilot_expt_500_p_scaffold_49073
Species: Niastella koreensis (50%)
2 1142 bp 43.17 2.19 100.09
SCNpilot_expt_500_p_scaffold_47956
Species: Flavihumibacter sp. ZG627 (50%)
2 1165 bp 44.21 2.58 99.40
SCNpilot_expt_500_p_scaffold_53452
Species: Flavihumibacter solisilvae (50%)
2 1062 bp 46.14 1.88 67.23
SCNpilot_expt_500_p_scaffold_50869
Species: Leadbetterella byssophila (100%)
2 1108 bp 42.51 1.35 82.31
SCNpilot_expt_500_p_scaffold_41047
Species: GWC2_Bacteroidetes_46_850_curated (50%)
2 1333 bp 42.84 1.50 75.84
SCNpilot_expt_500_p_scaffold_52663
Species: Flavobacterium sp. AED (50%)
2 1075 bp 46.51 2.33 97.40
SCNpilot_expt_500_p_scaffold_53968
Species: Niastella koreensis (50%)
2 1054 bp 44.21 4.74 88.52
SCNpilot_expt_500_p_scaffold_47961
Species: Niabella soli (50%)
2 1165 bp 42.92 2.79 98.88
SCNpilot_expt_500_p_scaffold_42754
Species: Solitalea canadensis (50%)
2 1286 bp 39.50 1.94 70.92
SCNpilot_expt_500_p_scaffold_44010
Species: Flavobacterium hydatis (50%)
2 1254 bp 39.95 2.79 88.04
SCNpilot_expt_500_p_scaffold_49594
Species: Fulvivirga imtechensis (100%)
2 1132 bp 33.30 1.00 63.87
SCNpilot_expt_500_p_scaffold_46915
Species: Pedobacter kyungheensis (50%)
2 1187 bp 41.20 1.00 97.56
SCNpilot_expt_500_p_scaffold_52156
Species: Chitinophaga pinensis (50%)
2 1084 bp 45.02 1.61 88.84
SCNpilot_expt_500_p_scaffold_49341
Species: Flavihumibacter solisilvae (50%)
2 1137 bp 41.51 1.32 90.77
SCNpilot_expt_500_p_scaffold_54902
Species: Niastella koreensis (50%)
2 1038 bp 45.76 1.93 59.54
SCNpilot_expt_500_p_scaffold_52926
Species: Fibrisoma limi (50%)
2 1071 bp 43.42 1.40 98.32
SCNpilot_expt_500_p_scaffold_36640
Species: Kangiella koreensis (50%)
2 1479 bp 40.97 2.37 99.59
SCNpilot_expt_500_p_scaffold_47969
Species: Rhizobium leguminosarum (50%)
2 1165 bp 42.66 2.15 87.30
SCNpilot_expt_500_p_scaffold_51620
Species: Bacteroides reticulotermitis (50%)
2 1094 bp 45.61 1.00 95.16
SCNpilot_expt_500_p_scaffold_46924
Species: Niabella soli (50%)
2 1187 bp 44.40 2.11 81.38
SCNpilot_expt_500_p_scaffold_44020
Species: Flavihumibacter petaseus (50%)
2 1254 bp 43.46 2.39 94.26
SCNpilot_expt_500_p_scaffold_39926
Species: Cyclobacterium qasimii (100%)
2 1367 bp 45.72 1.46 96.12
SCNpilot_expt_500_p_scaffold_57069
Species: Dysgonomonas gadei (50%)
2 1005 bp 47.36 1.49 89.25
SCNpilot_expt_500_p_scaffold_34807
Species: Flavihumibacter solisilvae (50%)
2 1551 bp 45.71 1.29 89.56
SCNpilot_expt_500_p_scaffold_47978
Species: Niastella koreensis (50%)
2 1164 bp 43.64 1.72 71.13
SCNpilot_expt_500_p_scaffold_54918
Species: Fibrisoma limi (50%)
2 1038 bp 42.49 2.89 81.21
SCNpilot_expt_500_p_scaffold_52431
Species: Niastella koreensis (50%)
2 1079 bp 39.57 2.32 60.89
SCNpilot_expt_500_p_scaffold_45711
Species: Algibacter lectus (50%)
2 1214 bp 44.56 2.88 43.99
SCNpilot_expt_500_p_scaffold_48960
Species: Niastella koreensis (100%)
2 1144 bp 44.06 1.75 98.60
SCNpilot_expt_500_p_scaffold_55240
Species: Niabella soli (100%)
2 1033 bp 38.92 2.90 100.19
SCNpilot_expt_500_p_scaffold_51889
Species: Elizabethkingia anophelis (50%)
2 1089 bp 42.06 3.67 96.69
SCNpilot_expt_500_p_scaffold_50643
Species: Flavihumibacter sp. ZG627 (50%)
2 1113 bp 48.79 1.00 86.79
SCNpilot_expt_500_p_scaffold_42783
Species: Flavihumibacter solisilvae (50%)
2 1286 bp 44.87 1.00 85.38
SCNpilot_expt_500_p_scaffold_36153
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1498 bp 39.52 2.67 85.31
SCNpilot_expt_500_p_scaffold_51384
Species: Flavihumibacter sp. ZG627 (50%)
2 1099 bp 46.41 1.36 86.81
SCNpilot_expt_500_p_scaffold_31291
Species: Flavihumibacter petaseus (50%)
2 1713 bp 43.84 2.04 87.04
SCNpilot_expt_500_p_scaffold_41083
Species: Fibrella aestuarina (50%)
2 1332 bp 35.14 3.00 99.10
SCNpilot_expt_500_p_scaffold_43669
Species: Flavihumibacter sp. ZG627 (50%)
2 1263 bp 42.68 3.37 92.16
SCNpilot_expt_500_p_scaffold_49632
Species: Flavihumibacter sp. ZG627 (50%)
2 1132 bp 48.76 2.21 99.91
SCNpilot_expt_500_p_scaffold_47233 2 1180 bp 36.53 3.60 62.80
SCNpilot_expt_500_p_scaffold_55257
Species: Bizionia argentinensis (50%)
2 1033 bp 43.85 2.18 61.28
SCNpilot_expt_500_p_scaffold_42793
Species: Niastella koreensis (100%)
2 1285 bp 42.57 3.50 75.41
SCNpilot_expt_500_p_scaffold_49891
Species: Niabella soli (50%)
2 1127 bp 47.12 1.77 74.80
SCNpilot_expt_500_p_scaffold_27797
Species: Rivularia sp. PCC 7116 (50%)
2 1906 bp 43.76 3.93 97.74
SCNpilot_expt_500_p_scaffold_29888
Species: Parabacteroides goldsteinii (50%)
2 1785 bp 40.84 1.96 94.96
SCNpilot_expt_500_p_scaffold_51402
Species: Cyclobacteriaceae bacterium AK24 (50%)
2 1098 bp 36.70 1.00 57.65
SCNpilot_expt_500_p_scaffold_55015
Species: Flavihumibacter solisilvae (50%)
2 1036 bp 46.91 1.69 86.58
SCNpilot_expt_500_p_scaffold_34594 2 1560 bp 34.49 2.24 100.00
Displaying items 101-150 of 318 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.